RNA id: TU302821


Basic Information

Item Value
RNA id TU302821
length 327
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G266795
representative True

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 7281932 ~ 7282258 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCTCCTTCCAAATAATTTAAACTGCAACTGACAGCTCTCAGTATCCGAACTGTCTTGTTGCATCCCACCACCACACCATTCTCCTCATATTTTAGATATGTTACTCCACTCTCATATGTTTGCTATGAATGGGAATTTACTACAATGGCAAAAACTATTTTGAATCACTTTTTTTTTTGCTTTTCTGAGGTCAAAAAGTCTTGTGTGGGGGCCTATAGAGGGGCCTTGGGGGCAAAAAGTTAAGAACCACATTATCTTCAGGAAATACACTGTATTGTAATGTCTTTTACATCCTTTCCCCAACTAAACTAAGAGACTAAGAGAGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU302697 lncRNA downstream 5367 7266521 ~ 7276565 (-) True G266677
TU302792 lncRNA downstream 56515 7225217 ~ 7225417 (-) True G266772
TU302710 lncRNA downstream 74064 7207154 ~ 7207868 (-) True CI01000063_07205887_07209986
TU302678 lncRNA downstream 157904 7078351 ~ 7124028 (-) True G266659
TU302766 lncRNA downstream 213684 7068035 ~ 7068248 (-) True G266746
TU302837 lncRNA upstream 50081 7332339 ~ 7332614 (-) True G266808
TU302847 lncRNA upstream 69079 7351337 ~ 7351637 (-) True G266818
TU302846 lncRNA upstream 69560 7351818 ~ 7352264 (-) True G266817
TU302680 lncRNA upstream 92513 7381082 ~ 7381335 (-) True G266661
TU302689 lncRNA upstream 154539 7436797 ~ 7438252 (-) True G266669
CI01000063_07217465_07224133.mRNA mRNA downstream 57610 7216986 ~ 7224322 (-) True CI01000063_07217465_07224133
CI01000063_07205887_07209986.mRNA mRNA downstream 71261 7205855 ~ 7210671 (-) False CI01000063_07205887_07209986
CI01000063_07147043_07192035.mRNA mRNA downstream 89897 7146006 ~ 7192035 (-) True CI01000063_07147043_07192035
CI01000063_07114269_07117313.mRNA mRNA downstream 164134 7113407 ~ 7117798 (-) True CI01000063_07114269_07117313
CI01000063_07092189_07106801.mRNA mRNA downstream 174177 7092090 ~ 7107755 (-) True CI01000063_07092189_07106801
CI01000063_07356051_07365604.mRNA mRNA upstream 73744 7356002 ~ 7365604 (-) True CI01000063_07356051_07365604
CI01000063_07369762_07372353.mRNA mRNA upstream 87454 7369712 ~ 7372353 (-) True CI01000063_07369762_07372353
CI01000063_07377062_07377408.mRNA mRNA upstream 94075 7376333 ~ 7377408 (-) False CI01000063_07377062_07377408
CI01000063_07394616_07396752.mRNA mRNA upstream 112358 7394616 ~ 7399019 (-) True CI01000063_07394616_07396752
CI01000063_07411237_07413430.mRNA mRNA upstream 127917 7410175 ~ 7413430 (-) True CI01000063_07411237_07413430
TU301878 other downstream 990986 6288158 ~ 6290946 (-) True G265976
TU301675 other downstream 1664820 5546701 ~ 5546719 (-) True G265781
TU301422 other downstream 2027992 5250835 ~ 5253940 (-) False CI01000063_05252331_05253850
TU301417 other downstream 2028121 5250835 ~ 5253811 (-) False CI01000063_05252331_05253850
TU302824 other upstream 7237 7289495 ~ 7290013 (-) False G266797
TU302823 other upstream 7470 7289728 ~ 7290013 (-) False G266797
TU302826 other upstream 7470 7289728 ~ 7290224 (-) True G266797
TU302679 other upstream 156827 7439085 ~ 7441435 (-) True G266660

Expression Profile