RNA id: TU302856


Basic Information

Item Value
RNA id TU302856
length 244
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G266827
representative True

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 7480634 ~ 7480877 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGTGAATCCGGCCAATCGTGAAACAGCTGTGTCATCATCAGAGCGCGTGCAGCCGGTCTTGAAATGTTGTGCAGAATAAACCAGCCAGCTGCTCTCGAATCGTTCTTGCGATACTTTGATGTCATACGTCACAGTCACATGGCGTCAGTGCTGTCTCAAGTCGGACAAAATTTCTAACCGGCATGCACTGCTTCAAGTCAGCCGCCGATCGGTCTGTGCAGCGCTGCATCAAGTCAAACAAGCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU302705 lncRNA downstream 13487 7464469 ~ 7467147 (-) True G266685
TU302689 lncRNA downstream 42382 7436797 ~ 7438252 (-) True G266669
TU302680 lncRNA downstream 99299 7381082 ~ 7381335 (-) True G266661
TU302846 lncRNA downstream 128370 7351818 ~ 7352264 (-) True G266817
TU302847 lncRNA downstream 128997 7351337 ~ 7351637 (-) True G266818
TU302660 lncRNA upstream 31059 7511936 ~ 7515695 (-) True G266647
TU302862 lncRNA upstream 41841 7522718 ~ 7522990 (-) True G266833
TU302690 lncRNA upstream 111577 7592454 ~ 7592720 (-) True G266670
TU302878 lncRNA upstream 207975 7688852 ~ 7689102 (-) True G266846
CI01000063_07458562_07458738.mRNA mRNA downstream 21780 7457815 ~ 7458854 (-) True CI01000063_07458562_07458738
CI01000063_07450175_07455382.mRNA mRNA downstream 25049 7449162 ~ 7455585 (-) True CI01000063_07450175_07455382
CI01000063_07424567_07426570.mRNA mRNA downstream 54064 7424361 ~ 7426570 (-) True CI01000063_07424567_07426570
CI01000063_07411237_07413430.mRNA mRNA downstream 67204 7410175 ~ 7413430 (-) True CI01000063_07411237_07413430
CI01000063_07394616_07396752.mRNA mRNA downstream 81615 7394616 ~ 7399019 (-) True CI01000063_07394616_07396752
CI01000063_07483274_07486490.mRNA mRNA upstream 2225 7483102 ~ 7487618 (-) True CI01000063_07483274_07486490
CI01000063_07493274_07509323.mRNA mRNA upstream 12135 7493012 ~ 7509323 (-) True CI01000063_07493274_07509323
CI01000063_07516671_07521503.mRNA mRNA upstream 35569 7516446 ~ 7521861 (-) True CI01000063_07516671_07521503
CI01000063_07525686_07551770.mRNA mRNA upstream 44809 7525686 ~ 7551770 (-) True CI01000063_07525686_07551770
CI01000063_07578043_07590189.mRNA mRNA upstream 97099 7577976 ~ 7590691 (-) True CI01000063_07578043_07590189
TU302679 other downstream 39199 7439085 ~ 7441435 (-) True G266660
TU302826 other downstream 190410 7289728 ~ 7290224 (-) True G266797
TU302824 other downstream 190621 7289495 ~ 7290013 (-) False G266797
TU302823 other downstream 190621 7289728 ~ 7290013 (-) False G266797
TU301878 other downstream 1189688 6288158 ~ 6290946 (-) True G265976

Expression Profile