RNA id: CI01000065_00036512_00040370.mRNA


Basic Information

Item Value
RNA id CI01000065_00036512_00040370.mRNA
length 1375
RNA type mRNA
GC content 0.41
exon number 3
gene id CI01000065_00036512_00040370
representative False

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 35848 ~ 40770 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGGGTGCCATATTTTTGCTGGTTTTATTACTTTTATTTAATCTTGCCATTGGAACATTACCAAATAGGATTCAGTATACCCGAGACTTTCCCCTTGGATTGAACGCTGGTAGCTTGGTGCCGAGGCAACTCGAAAACTTTCCCCTGTTTAAGGACACTACTACGGCTCATAACAACCAGCTCATTGGTCCTGAAGAAAATCGCGGGACTAAGACGTGGCTGACGGATGCAGACACGGATTCTGCTTTTATCGACGGATTTGGAGTGCCAATTCCCGAGAGGAAAGATCAGATCAGGCTGGTTCTGCTGGGAAAAACTGGATCTGGGAAAAGTGCAGCAGGAAACACCATTGGTGAAAGTGTGTTTGAATCCTCCATCAGCTCAAACTCTCAAGCCAAACAGTGTCAATCAGAAAGTCCAGTGAGGAACGGTAAAAAGATTTCAGTGATCAACACATCTGGACTTTATGATAATGAACTCAGTGAAGAGGAGGTTATTACTGAATCAGTGAAGTGCATAACATACTCGTCTCCTGGACCACATGCTTTCATTATCATGATTAAAGTGGGTCGATTCACCAAAGAAAAACACAATAAAGGAGTGTTTGGAGAACAGATAGAACAATACACCAGGATCATCTTCACCCATAAAGATCAGTTAGAAAATAAAAACAGTTTTTGCAGCAAAGTGATCCAGATCTTAAACTTGTAGATAGCTGTGGAAAGCGATACTTCTGTTTAGACAACGAGTCTGCCAGTTTCCCCAGTTCAAAGATCTGATCAGTAAAATAGAGGCGATGGTGAGAGTAAACGGAGGACACTTTGCATTTCTCAGTTCCCTCAAACATTGTATTCAGGAGATACAGAAGTTGCATGAGAAAGTGGAGCAGTTCAAACAGGAGAAAAACGGGGGCTTTCTAACAGAAAATATACTGGAGTTTAACAGAGGAGTCTCGACATGAAGCTGAACGGGTTATGATCACTCATGGCAGCTGCAGCCCAAGTCCTGGGAAAGTGTTTGGTGAGCTCTGAGGAGAAACAGAGCGTCATACAGGAGGACGAGAGCACAGGAATCAGTCAGAAGAAGGCCATTCGACTGGCAGTCAGAGCCACAGGGAAACTAGCAAGACAGAGATTCAGTGATGATCAAACTCAAACTTTTGAGCTTTTTTCTTTCTAAAGATTTGTCTTTTTATTGAGAAGATCCACCCACATGTTTGTTTGTCCCCAAAACATGTTTTATGAGACGATTCTGCTGGCTTTAACCATGTGAGAAACCTTTTTTTATTCAGTTAACACTTTGGAAGAAATTTTTAACAAAGTTTTTTAACAAATTCTTGTTTTTGCCAGTATATGGAAACTATATGTGAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU303070 lncRNA upstream 6103 46473 ~ 46710 (-) True G267028
TU303069 lncRNA upstream 11515 51885 ~ 52167 (-) False CI01000065_00050903_00055774
TU303080 lncRNA upstream 26640 67010 ~ 67268 (-) True G267035
TU303081 lncRNA upstream 28446 68816 ~ 69021 (-) True G267036
TU303084 lncRNA upstream 33148 73518 ~ 73862 (-) True G267039
CI01000065_00000511_00000912.mRNA mRNA downstream 34936 131 ~ 912 (-) True CI01000065_00000511_00000912
CI01000065_00050903_00055774.mRNA mRNA upstream 10016 50386 ~ 55774 (-) False CI01000065_00050903_00055774
CI01000065_00076766_00091631.mRNA mRNA upstream 36315 76685 ~ 91631 (-) True CI01000065_00076766_00091631
CI01000065_00097164_00097583.mRNA mRNA upstream 56534 96904 ~ 97590 (-) True CI01000065_00097164_00097583
CI01000065_00120723_00133111.mRNA mRNA upstream 80036 120406 ~ 133111 (-) True CI01000065_00120723_00133111
CI01000065_00253168_00255665.mRNA mRNA upstream 212321 252691 ~ 255710 (-) True CI01000065_00253168_00255665
TU303066 other upstream 2669 43039 ~ 46087 (-) True G267024
TU303067 other upstream 13032 54287 ~ 54387 (-) True G267025
TU303798 other upstream 513981 554351 ~ 556828 (-) True G267718
TU303796 other upstream 514098 554468 ~ 556828 (-) True G267718
TU303828 other upstream 582062 622432 ~ 624657 (-) True CI01000065_00622545_00624625

Expression Profile