RNA id: CI01000065_00268067_00268655.mRNA



Basic Information


Item Value
RNA id CI01000065_00268067_00268655.mRNA
length 640
RNA type mRNA
GC content 0.47
exon number 2
gene id CI01000065_00268067_00268655
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 268067 ~ 268788 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGCACCCTTAAATCTGGGGATACTGCAGCATACAGCCTGGCAAGGAAAAATCTGTCCCAGGGGATCAGGAAAGCAAAGAGGCTGTATGCTCAAAAACTAAACAGCCACTTCACAAATGACAGAGACTCAGATGAACTAAATAACGTTTACGCACGTTTTGAGGCCAACGACACCATTCAGGCATGGATGCTCCCATCTCTACCCAGCGATCAAGCACTCCAGCTGTCAACAACTGAAGTGAAAAAGGGCCTTGCAAGCGTTAACACACGTAAAGCTACAGGGCCGGATGACATCCATGGACATGTTTTAAAGGACTGTACAGAGCAACTGAAGGATGTTTTTGCAGATGTTTTTAATATCTTGCTCAGTCAGGCAGTAGCTCTTACTTGCCTCAAAAGTGCCAACATCATTCCTGTCCCGAAGAAGCCTAATCCAGCCTGCCTAAATGATTTCTGCCCTGTGGCCCTCACACCAATTGTAATGAAATGCTTCGAGCGACTGGCATAGCCGCGGGAACATATTTTATCAGGGGGGTGCTGGGGGGGGCGGGGCTTAATGTTGGGGCGGTTGGGGGATTGCCGCGGTGGGGGATTTTAAACAAAATCCTAATATTAAACAGCTCTTATAGATGAACATACAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303133 lncRNA upstream 65375 202452 ~ 202692 (+) True G267087
TU303131 lncRNA upstream 67345 200484 ~ 200722 (+) True G267085
TU303127 lncRNA upstream 71039 196692 ~ 197028 (+) True G267081
TU303121 lncRNA upstream 77379 190479 ~ 190688 (+) True G267075
TU303106 lncRNA upstream 113255 154606 ~ 154812 (+) True G267060
TU303192 lncRNA downstream 4693 273481 ~ 273912 (+) True G267143
TU303207 lncRNA downstream 15111 283899 ~ 284242 (+) True G267158
TU303218 lncRNA downstream 20396 289184 ~ 289452 (+) True G267169
TU303238 lncRNA downstream 40648 309436 ~ 309827 (+) True G267189
TU303248 lncRNA downstream 51816 320604 ~ 320870 (+) True G267199
CI01000065_00008351_00023809.mRNA mRNA upstream 243729 8351 ~ 24338 (+) True CI01000065_00008351_00023809
CI01000065_00001128_00004874.mRNA mRNA upstream 262883 1128 ~ 5184 (+) True CI01000065_00001128_00004874
CI01000065_00390457_00395371.mRNA mRNA downstream 121669 390457 ~ 396151 (+) True CI01000065_00390457_00395371
CI01000065_00408239_00434714.mRNA mRNA downstream 139360 408148 ~ 435407 (+) True CI01000065_00408239_00434714
CI01000065_00466096_00487259.mRNA mRNA downstream 197188 465976 ~ 487278 (+) True CI01000065_00466096_00487259
CI01000065_00491304_00503042.mRNA mRNA downstream 222360 491148 ~ 503458 (+) True CI01000065_00491304_00503042
CI01000065_00506921_00509678.mRNA mRNA downstream 238133 506921 ~ 510257 (+) False CI01000065_00506921_00509678
TU302970 other upstream 223401 43038 ~ 44666 (+) True G266932
TU303494 other downstream 513495 782283 ~ 782879 (+) True G267432
TU303653 other downstream 813365 1082153 ~ 1082655 (+) True G267577
TU304676 other downstream 1970371 2239159 ~ 2239998 (+) True G268525
TU304991 other downstream 2340119 2608907 ~ 2638205 (+) True G268805
TU305428 other downstream 3190169 3458957 ~ 3462928 (+) True G269181

Expression Profile