RNA id: CI01000065_00444905_00447425.mRNA



Basic Information


Item Value
RNA id CI01000065_00444905_00447425.mRNA
length 1632
RNA type mRNA
GC content 0.45
exon number 4
gene id CI01000065_00444905_00447425
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 444680 ~ 447425 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGGCTACTCATCCTGAATTTCAGCTTGACCTAACTGACTGGCCCTCAGTCGCAGACTCTCTTCCACAACAGACAAAGGCTAACAGTATGCCCACAAGGGATGTTCACTGTTTTAAATGCTCCTTGCCTGAATTCACCACTCGTACATGCCCTAACTGTAGTCCAGGAATAAAGCCACGTTCGCCTCCAACAGAGCCCCCAAGAGTGACGGGTGATACTGTCAATAGACCGCCGGACTGTTTCTATCATCGCTTTGCTGTTGTCCATAATCTATCTTCTCCTGTTATCTTGGGAATGGACTTTATGTTGAGGTCTTCAGTCACAATCCATGTTCCGTCTAGGTCAGTGGTGCTCGGTGATGAGCCAATGCCCCTTGAGGAGTTGGAGGGCAATGACTTAACTATGCCTGTCCCTGATTTGTCATGCCTGGAGGTCGGCTCTTCTTTCCTGTCTGAAAAGGTTAAAGAAGCATCCCTAAATAACGAACAGAAAAGCAAATTGACTGAATTGCTCGAGACCTTCAGTGGTTTGTTTGACGGACATTTGGGATGCACCTCGCTAGTAGAGCATGAGATTGTCACAGGTGATGCAAAACCAGTTCACCTTGCCCCTTACCGCACCTCTCCTGCTAAAAAGGAACTCATTGAATCTCAAATCAAGGAGATGTTGAAGGAAGGAATAATTGAACCCGCTTCTGGTCCTTGGGCTGCCCCAGTCGTAATCGTCCCAAAACAATCGGGTGAGCCAAGATTCTGTGTTGATTATCGTGCACTCAATAAGCTCACAGTCAAAGACTCATATCCACTCCCGAGGATTGATGAATCTCTCGACTTCCTGGCTAGAGGGACTTTGATTTCCACCAGTGACTTGGCCAGAGGCTATTGGCAGGTGGCGGTGGCGGAGAACTCAAACTCAGAGGCTTATGAACACTGTAATCGCTGGTCACATCTACAAGTCTTGTGCCGTCTACTTAGACGATATTGCGGCTCTTATCGTATTACACAAAAGCTGTCAGAAGTGAACTACAGACTCGTTGATGTGAATACAGGAGCAGACGCAGGTGTATTTCATGTCGCAAATCTGCTGCCTTTTCGTACCTGGGACCCACTTGTTGAAACCGAGACTGTGCCTGCAGATGGTTCTGCTGAAGAAGCAACAACTGACAGTTCTTTGCTGAATGACATACCTGAGGAAACAAGTAGTGGTGCTACCGCAATGAACTTCACACTCCTGCAAATTAAGGATGAATACAGTCGCCCAGTAACTACAAGTGTTCATGATCTGTCAGGAAGTGTGGACAGTGTTGGTTGTTTTCCTGACCTACAGGTTGACTCTGGAACTCAGAACGATGACTTGACTGTTGATGATAATGATCTTGACAGACACCACTATGACTTAAGACCTTGACGTGCACCAAGAATCACCTTAGACTGGTCGACTAACAGGTGGACGAACGTGTACCACACAGACAAACTTGATCTTAAATAGTGTGTTAATGTAAATGTGGGTTCATATGTTTTGTTTGACACTGTGAAGTGCAAAAGGTTTACCACCTTCTGTATAAAAGAAAAGGGAATTAGCGTAAATGATCAGTCTGTTGACATGTTGTTTGTTATAGTGTTGAACAAAAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303397 lncRNA downstream 7117 437334 ~ 437563 (-) True G267339
TU303366 lncRNA downstream 23520 420939 ~ 421160 (-) True G267310
TU303350 lncRNA downstream 31550 412902 ~ 413130 (-) True G267294
TU303348 lncRNA downstream 32534 411269 ~ 412146 (-) True G267292
TU303329 lncRNA downstream 45521 398942 ~ 399159 (-) True G267273
TU303473 lncRNA upstream 56850 504275 ~ 504481 (-) True G267411
TU303801 lncRNA upstream 64269 511694 ~ 512168 (-) True G267721
TU303802 lncRNA upstream 65088 512513 ~ 512750 (-) True G267722
TU303809 lncRNA upstream 77454 524879 ~ 525584 (-) True G267728
TU303821 lncRNA upstream 100575 548000 ~ 549479 (-) True G267739
CI01000065_00330696_00340165.mRNA mRNA downstream 103908 330592 ~ 340772 (-) True CI01000065_00330696_00340165
CI01000065_00253168_00255665.mRNA mRNA downstream 188970 252691 ~ 255710 (-) True CI01000065_00253168_00255665
CI01000065_00120723_00133111.mRNA mRNA downstream 311569 120406 ~ 133111 (-) True CI01000065_00120723_00133111
CI01000065_00097164_00097583.mRNA mRNA downstream 347090 96904 ~ 97590 (-) True CI01000065_00097164_00097583
CI01000065_00076766_00091631.mRNA mRNA downstream 353049 76685 ~ 91631 (-) True CI01000065_00076766_00091631
CI01000065_00563411_00579174.mRNA mRNA upstream 115423 562848 ~ 580083 (-) False CI01000065_00563411_00579174
CI01000065_00622545_00624625.mRNA mRNA upstream 174698 622123 ~ 624625 (-) False CI01000065_00622545_00624625
CI01000065_00768127_00769942.mRNA mRNA upstream 320147 767572 ~ 770151 (-) True CI01000065_00768127_00769942
CI01000065_00782736_00793467.mRNA mRNA upstream 335311 782736 ~ 793467 (-) False CI01000065_00782736_00793467
CI01000065_00843437_00865598.mRNA mRNA upstream 396007 843432 ~ 865598 (-) True CI01000065_00843437_00865598
TU303067 other downstream 390293 54287 ~ 54387 (-) True G267025
TU303066 other downstream 398593 43039 ~ 46087 (-) True G267024
TU303798 other upstream 106926 554351 ~ 556828 (-) True G267718
TU303796 other upstream 107043 554468 ~ 556828 (-) True G267718
TU303828 other upstream 175007 622432 ~ 624657 (-) True CI01000065_00622545_00624625
TU303837 other upstream 335272 783538 ~ 783661 (-) True G267748
TU305637 other upstream 2861018 3308443 ~ 3312404 (-) False G269348

Expression Profile