RNA id: CI01000065_02358877_02366169.mRNA


Basic Information

Item Value
RNA id CI01000065_02358877_02366169.mRNA
length 471
RNA type mRNA
GC content 0.46
exon number 5
gene id CI01000065_02358877_02366169
representative False

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 2358853 ~ 2366169 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACCGTCATATCGCTGATATACTGTGGAAAGGGAATGAAAGGTGACCTGCAGGCCTTAAAGAGGCAAGGGGGGATTTTTGAACAAATGGATGGACCTGTGGCACTCGTCAGCTCAGAGGAACTGGCCTTCAAATTCGCTGTTAATAACATCAACAGAAACAGGACGTTATTGCCCAACACAACGTTAACATATGATATTCAGAGGATTAATATCTATGATAGCTTTGAGGCCTCCAGAAAAGGCCCAGATGATGGGGATGATGACAGAGTACTATCACTACATCTTCACCACTCTGGTGAAGGCAGAGATAAGGCTGGGCCCGTCTCTAACCCCTCTGCTAAATCCATTTGCGATGCCCATGATCTAGATCGCCGCTGTGCCAGCAGCGGGACCCGAACCAAGTTCCAAAATCAAACTGCATTTAATATACAAGGGGAGCTCAGATGACCCCGTCATCTGAGACATAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU304882 lncRNA downstream 98045 2260492 ~ 2260808 (-) True G268701
TU304868 lncRNA downstream 115428 2241130 ~ 2243425 (-) True G268687
TU304854 lncRNA downstream 118869 2239140 ~ 2239984 (-) True G268679
TU304859 lncRNA downstream 123582 2235053 ~ 2235271 (-) True G268684
TU304855 lncRNA downstream 131159 2227441 ~ 2227694 (-) True G268680
TU304832 lncRNA upstream 33158 2399327 ~ 2420933 (-) True G268657
TU304826 lncRNA upstream 55240 2421409 ~ 2444773 (-) False G268655
TU304936 lncRNA upstream 171939 2538108 ~ 2538324 (-) True G268751
TU304944 lncRNA upstream 179937 2546106 ~ 2546464 (-) True G268759
TU304976 lncRNA upstream 226364 2592533 ~ 2592919 (-) True G268790
CI01000065_02288372_02357728.mRNA mRNA downstream 1125 2288372 ~ 2357728 (-) False CI01000065_02288372_02357728
CI01000065_01982908_01987337.mRNA mRNA downstream 371365 1982403 ~ 1987488 (-) False CI01000065_01982908_01987337
CI01000065_01955024_01969974.mRNA mRNA downstream 388630 1952778 ~ 1970223 (-) True CI01000065_01955024_01969974
CI01000065_01911879_01931555.mRNA mRNA downstream 427298 1911512 ~ 1931555 (-) True CI01000065_01911879_01931555
CI01000065_01373412_01382125.mRNA mRNA downstream 975906 1373274 ~ 1382947 (-) True CI01000065_01373412_01382125
CI01000065_02679973_02700843.mRNA mRNA upstream 313670 2679839 ~ 2701444 (-) True CI01000065_02679973_02700843
CI01000065_02820772_02829132.mRNA mRNA upstream 453543 2819712 ~ 2829132 (-) True CI01000065_02820772_02829132
CI01000065_02940142_02940429.mRNA mRNA upstream 573885 2940054 ~ 2940813 (-) True CI01000065_02940142_02940429
CI01000065_02979795_02989709.mRNA mRNA upstream 611674 2977843 ~ 2989763 (-) False CI01000065_02979795_02989709
CI01000065_02992054_02993108.mRNA mRNA upstream 625646 2991815 ~ 2993167 (-) True CI01000065_02992054_02993108
TU303837 other downstream 1575192 783538 ~ 783661 (-) True G267748
TU303828 other downstream 1734196 622432 ~ 624657 (-) True CI01000065_00622545_00624625
TU303796 other downstream 1778826 554468 ~ 556828 (-) True G267718
TU303798 other downstream 1794639 554351 ~ 556828 (-) True G267718
TU303067 other downstream 2304466 54287 ~ 54387 (-) True G267025
TU305637 other upstream 942274 3308443 ~ 3312404 (-) False G269348
TU305628 other upstream 942619 3308788 ~ 3312404 (-) False G269348
TU305632 other upstream 942619 3308788 ~ 3312480 (-) True G269348
TU306020 other upstream 1407711 3773880 ~ 3774294 (-) True G269679
TU305995 other upstream 1426954 3807558 ~ 3810160 (-) False G269656

Expression Profile