RNA id: CI01000065_04470763_04478735.mRNA



Basic Information


Item Value
RNA id CI01000065_04470763_04478735.mRNA
length 1557
RNA type mRNA
GC content 0.33
exon number 4
gene id CI01000065_04470763_04478735
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 4469999 ~ 4479108 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CGCCCCCCACATGTCGATTAACCGGTGGGAACATTTTCTCACCGTCACATCCCTAATTCAAATGAATAAATGAATAAAATGTGATTAAAAAAATATTATAATGTAACTTATAATAAATAAACTGATTTTAGATATATAATATTAATACTTAAGTGTATACATTTGGGTTTTTATAAAAGATAGATGTCTTTTAAATGTTAGGATCGGGGTCCTTAACACTAAGATGATCATATTTTGGGGTCCGTGGAATTCGGGTCTAGGTAGAGTTACGTGTGTCAATCAAAACTCCTCCCACGCGTTCAGCCAATCAGAGCAGCAGTGGTCCATGTGAGTGTTGACGTCAGCACGCTTTTCCTGCTTGGTTTCCAGCGCAATGGCGGCTACGCGGCTCTTCTTGAGAACTTCAGGCGTTAAGTCTTCATTAACCGGGTTAACCGGTGGCGTGCACAGCAGTTTGGGGTTAACTCTGCTTAAACTGTCTCCCGACTGCACAGCCAAGCCGAAAGCACAGAGAAGACATGCAGCGCACTTCACCTATCATCCTGACCCTGTGCCTACTCAGTATGGCCCCACACAGAAGATGAATTTGTTCCAGTCAGTAACCAGTGCCTTGGACAACACGCTTGCCAGTGATCCCACCGCAGTGATTTTTGGTGAGGATGTGGCGTTTGGTGGGGTGTTTCGATGCACAGTCGGCCTCCGAGATAAATATGATGGCAGCACTGTCACACTCCTGGCTATCACAATCAAACATTTGCTTACTGTTGACTGTGCACTGCGTACTTTAACATAAGGCTATACACAGTAAAGAGTAGGCAAGTAAGTGTGAGTGGTGTCAGTTATTAACTTGGAAATATAAATGCTGAACGTTTTAAAATGTTAATTTTAAAACTTGATATTTTTTAGTTTGGTGTAAAAATGTCATACCTTTTAGGAGAGAAAAGAAAGTCGAGGAAGAGATGTCTAAAAAAACAAAACTAAAACCATATTTTTTTCCATTTATTAAAATAATAATAATTATTATTATTAATAAATTAAAATTAATATTATGAAAATTATTTTCATTATGTGAAATAAAATAAACATTAACAAAAGTAAGATAATATATAAAAACTTTTTAGTTTTAATTATTTTATTTCATTATTTTAACTAAAAAACTAAATCAACTAAATCATATTAAAACAACATAGACTTTTTTTTAAAGTAATAAAAATAGCAAAACCACAAAAAAAAAAAAAAATATATATATATATATATAAAATATAACATTATATATATATATATATATAATATATATATCATAATATAATAAAAATCTAATTCAAAGTATTAACAAAAATTAAACAAAAACTAAATTAACACTGGCCTGAAATCCCTTCCTTTGGACAATCAAGGAGAGTGCATTGCATTGTGGGATGCAGTAGTCTGTTGTATTTGGTCATTTGGTATCTATCTTGATGGTGATTATTTGCTTTTATGTTAATCTGCTATATTAAGAGGTGTTCAGTGTGCTCAAAATTGCAACTAAAATTTGAAAGCTGCATAAATCAGAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU306668 lncRNA downstream 96785 4372764 ~ 4373214 (-) True G270242
TU306666 lncRNA downstream 98857 4370808 ~ 4371142 (-) True G270240
TU306722 lncRNA downstream 133535 4336207 ~ 4336464 (-) True G270288
TU306721 lncRNA downstream 133816 4335857 ~ 4336183 (-) True G270287
TU306697 lncRNA downstream 155962 4298982 ~ 4314037 (-) True G270268
TU306745 lncRNA upstream 4182 4483290 ~ 4483633 (-) True G270311
TU306779 lncRNA upstream 96331 4575439 ~ 4575701 (-) True G270345
TU306849 lncRNA upstream 174587 4653695 ~ 4655279 (-) True G270404
TU306816 lncRNA upstream 230263 4714765 ~ 4736681 (-) True G270373
TU306887 lncRNA upstream 284974 4764082 ~ 4764604 (-) True G270442
CI01000065_04318691_04330504.mRNA mRNA downstream 139217 4318435 ~ 4330782 (-) True CI01000065_04318691_04330504
CI01000065_04178828_04180116.mRNA mRNA downstream 289883 4177958 ~ 4180116 (-) True CI01000065_04178828_04180116
CI01000065_04070422_04072088.mRNA mRNA downstream 397911 4070204 ~ 4072088 (-) True CI01000065_04070422_04072088
CI01000065_04027497_04039742.mRNA mRNA downstream 430257 4026510 ~ 4039742 (-) True CI01000065_04027497_04039742
CI01000065_03944604_03949933.mRNA mRNA downstream 519812 3944581 ~ 3950187 (-) True CI01000065_03944604_03949933
CI01000065_04484009_04501087.mRNA mRNA upstream 4901 4484009 ~ 4501087 (-) True CI01000065_04484009_04501087
CI01000065_04507862_04513517.mRNA mRNA upstream 28754 4507862 ~ 4513517 (-) True CI01000065_04507862_04513517
CI01000065_04657955_04662886.mRNA mRNA upstream 178501 4657609 ~ 4663107 (-) True CI01000065_04657955_04662886
CI01000065_04705952_04710430.mRNA mRNA upstream 226791 4705899 ~ 4710588 (-) False CI01000065_04705952_04710430
CI01000065_04876578_04886460.mRNA mRNA upstream 396671 4875779 ~ 4887207 (-) True CI01000065_04876578_04886460
TU305996 other downstream 659756 3807558 ~ 3810243 (-) True G269656
TU305995 other downstream 659839 3807558 ~ 3810160 (-) False G269656
TU306020 other downstream 695705 3773880 ~ 3774294 (-) True G269679
TU305632 other downstream 1157519 3308788 ~ 3312480 (-) True G269348
TU305628 other downstream 1157595 3308788 ~ 3312404 (-) False G269348

Expression Profile