RNA id: TU303248



Basic Information


Item Value
RNA id TU303248
length 267
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G267199
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 320604 ~ 320870 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TAGAAAAGTACCTAATGCCCACTGTGAAGAATGATGGTGGATTTTTATTTCCTGTGGGACTAACTTTCATTCAAAGACCCTGGACAACTTGTTAAAATGCATGATATCATAAGCTCCATTAATTACCAGCCGCTATTAAATCAAATCCTAACCGACCCTGTCAAGAAGCTTGAACTGGAAAGTAATCCAAAGCACATTTGCTTTGGACACAGAATGAAGGTTTTGCCATGGATATAGCAGTCCCCTGACCCAAACCTTATAGAAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303238 lncRNA upstream 10777 309436 ~ 309827 (+) True G267189
TU303218 lncRNA upstream 31152 289184 ~ 289452 (+) True G267169
TU303207 lncRNA upstream 36362 283899 ~ 284242 (+) True G267158
TU303192 lncRNA upstream 46692 273481 ~ 273912 (+) True G267143
TU303133 lncRNA upstream 117912 202452 ~ 202692 (+) True G267087
TU303259 lncRNA downstream 10312 331182 ~ 331559 (+) True G267210
TU303286 lncRNA downstream 31255 352125 ~ 352476 (+) True G267231
TU303300 lncRNA downstream 43586 364456 ~ 364664 (+) True G267245
TU303303 lncRNA downstream 46595 367465 ~ 367668 (+) True G267248
TU303394 lncRNA downstream 115392 436262 ~ 436600 (+) True G267336
CI01000065_00268067_00268655.mRNA mRNA upstream 51816 268067 ~ 268788 (+) True CI01000065_00268067_00268655
CI01000065_00008351_00023809.mRNA mRNA upstream 296266 8351 ~ 24338 (+) True CI01000065_00008351_00023809
CI01000065_00001128_00004874.mRNA mRNA upstream 315420 1128 ~ 5184 (+) True CI01000065_00001128_00004874
CI01000065_00390457_00395371.mRNA mRNA downstream 69587 390457 ~ 396151 (+) True CI01000065_00390457_00395371
CI01000065_00408239_00434714.mRNA mRNA downstream 87278 408148 ~ 435407 (+) True CI01000065_00408239_00434714
CI01000065_00466096_00487259.mRNA mRNA downstream 145106 465976 ~ 487278 (+) True CI01000065_00466096_00487259
CI01000065_00491304_00503042.mRNA mRNA downstream 170278 491148 ~ 503458 (+) True CI01000065_00491304_00503042
CI01000065_00506921_00509678.mRNA mRNA downstream 186051 506921 ~ 510257 (+) False CI01000065_00506921_00509678
TU302970 other upstream 275938 43038 ~ 44666 (+) True G266932
TU303494 other downstream 461413 782283 ~ 782879 (+) True G267432
TU303653 other downstream 761283 1082153 ~ 1082655 (+) True G267577
TU304676 other downstream 1918289 2239159 ~ 2239998 (+) True G268525
TU304991 other downstream 2288037 2608907 ~ 2638205 (+) True G268805
TU305428 other downstream 3138087 3458957 ~ 3462928 (+) True G269181

Expression Profile