RNA id: TU303257


Basic Information

Item Value
RNA id TU303257
length 225
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G267208
representative True

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 328968 ~ 329192 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTGATAACTGGTATATAATTTTTGGCTGCAAAGCAGCTCTTAAAGAAAATGGTGTCATTGTCCAGCTTAAGTAAATTCAGTATTGATTCATTCCATTGTAAGGATCAATAGTTATTAATTTAGTTAATTTATCTCAGCACTGGAGTAAACAGTGATGTCATCATCCAGCTCAGTTCAGTTCGCATACAATGGTGTCGATGCAGGCAGATCAAAACATTGTTGAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU303254 lncRNA downstream 2754 325723 ~ 326214 (-) True G267205
TU303239 lncRNA downstream 19082 309626 ~ 309886 (-) True G267190
TU303224 lncRNA downstream 31790 296948 ~ 297178 (-) True G267175
TU303208 lncRNA downstream 44869 283872 ~ 284099 (-) True G267159
TU303189 lncRNA downstream 58109 270611 ~ 270859 (-) True G267140
TU303261 lncRNA upstream 2157 331349 ~ 331571 (-) True G267212
TU303329 lncRNA upstream 69750 398942 ~ 399159 (-) True G267273
TU303348 lncRNA upstream 82077 411269 ~ 412146 (-) True G267292
TU303350 lncRNA upstream 83710 412902 ~ 413130 (-) True G267294
TU303366 lncRNA upstream 91747 420939 ~ 421160 (-) True G267310
CI01000065_00253168_00255665.mRNA mRNA downstream 73258 252691 ~ 255710 (-) True CI01000065_00253168_00255665
CI01000065_00120723_00133111.mRNA mRNA downstream 195857 120406 ~ 133111 (-) True CI01000065_00120723_00133111
CI01000065_00097164_00097583.mRNA mRNA downstream 231378 96904 ~ 97590 (-) True CI01000065_00097164_00097583
CI01000065_00076766_00091631.mRNA mRNA downstream 237337 76685 ~ 91631 (-) True CI01000065_00076766_00091631
CI01000065_00050903_00055774.mRNA mRNA downstream 273194 50386 ~ 55774 (-) False CI01000065_00050903_00055774
CI01000065_00330696_00340165.mRNA mRNA upstream 1400 330592 ~ 340772 (-) True CI01000065_00330696_00340165
CI01000065_00444905_00447425.mRNA mRNA upstream 115488 444680 ~ 447425 (-) True CI01000065_00444905_00447425
CI01000065_00563411_00579174.mRNA mRNA upstream 233656 562848 ~ 580083 (-) False CI01000065_00563411_00579174
CI01000065_00622545_00624625.mRNA mRNA upstream 292931 622123 ~ 624625 (-) False CI01000065_00622545_00624625
CI01000065_00768127_00769942.mRNA mRNA upstream 438380 767572 ~ 770151 (-) True CI01000065_00768127_00769942
TU303067 other downstream 274581 54287 ~ 54387 (-) True G267025
TU303066 other downstream 282881 43039 ~ 46087 (-) True G267024
TU303798 other upstream 225159 554351 ~ 556828 (-) True G267718
TU303796 other upstream 225276 554468 ~ 556828 (-) True G267718
TU303828 other upstream 293240 622432 ~ 624657 (-) True CI01000065_00622545_00624625
TU303837 other upstream 453505 783538 ~ 783661 (-) True G267748
TU305637 other upstream 2979251 3308443 ~ 3312404 (-) False G269348

Expression Profile