RNA id: TU303261


Basic Information

Item Value
RNA id TU303261
length 223
lncRNA type intronic
GC content 0.37
exon number 1
gene id G267212
representative True

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 331349 ~ 331571 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGCTCATTAGGGGCAGGGTCTTAATCTCCTCAGGTGTGAATCACAGCATTATTCATGAAGATTCATGCCTCTTCGCATACGGGCTCCCTAAACAAAAAGTGTCTTAGAAATTTAAAATCAATACATTGTTTTTTGTGTCCGAGTAGGCAGGATAATTTCCACATCATTTTGAAGCAAAAACTCTAGACTAAAATATACAATTCCCAAAAGTCTTGTGAAAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU303257 lncRNA downstream 2157 328968 ~ 329192 (-) True G267208
TU303254 lncRNA downstream 5135 325723 ~ 326214 (-) True G267205
TU303239 lncRNA downstream 21463 309626 ~ 309886 (-) True G267190
TU303224 lncRNA downstream 34171 296948 ~ 297178 (-) True G267175
TU303208 lncRNA downstream 47250 283872 ~ 284099 (-) True G267159
TU303329 lncRNA upstream 67371 398942 ~ 399159 (-) True G267273
TU303348 lncRNA upstream 79698 411269 ~ 412146 (-) True G267292
TU303350 lncRNA upstream 81331 412902 ~ 413130 (-) True G267294
TU303366 lncRNA upstream 89368 420939 ~ 421160 (-) True G267310
TU303397 lncRNA upstream 105763 437334 ~ 437563 (-) True G267339
CI01000065_00253168_00255665.mRNA mRNA downstream 75639 252691 ~ 255710 (-) True CI01000065_00253168_00255665
CI01000065_00120723_00133111.mRNA mRNA downstream 198238 120406 ~ 133111 (-) True CI01000065_00120723_00133111
CI01000065_00097164_00097583.mRNA mRNA downstream 233759 96904 ~ 97590 (-) True CI01000065_00097164_00097583
CI01000065_00076766_00091631.mRNA mRNA downstream 239718 76685 ~ 91631 (-) True CI01000065_00076766_00091631
CI01000065_00050903_00055774.mRNA mRNA downstream 275575 50386 ~ 55774 (-) False CI01000065_00050903_00055774
CI01000065_00444905_00447425.mRNA mRNA upstream 113109 444680 ~ 447425 (-) True CI01000065_00444905_00447425
CI01000065_00563411_00579174.mRNA mRNA upstream 231277 562848 ~ 580083 (-) False CI01000065_00563411_00579174
CI01000065_00622545_00624625.mRNA mRNA upstream 290552 622123 ~ 624625 (-) False CI01000065_00622545_00624625
CI01000065_00768127_00769942.mRNA mRNA upstream 436001 767572 ~ 770151 (-) True CI01000065_00768127_00769942
CI01000065_00782736_00793467.mRNA mRNA upstream 451165 782736 ~ 793467 (-) False CI01000065_00782736_00793467
TU303067 other downstream 276962 54287 ~ 54387 (-) True G267025
TU303066 other downstream 285262 43039 ~ 46087 (-) True G267024
TU303798 other upstream 222780 554351 ~ 556828 (-) True G267718
TU303796 other upstream 222897 554468 ~ 556828 (-) True G267718
TU303828 other upstream 290861 622432 ~ 624657 (-) True CI01000065_00622545_00624625
TU303837 other upstream 451126 783538 ~ 783661 (-) True G267748
TU305637 other upstream 2976872 3308443 ~ 3312404 (-) False G269348

Expression Profile