RNA id: TU303473


Basic Information

Item Value
RNA id TU303473
length 207
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G267411
representative True

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 504275 ~ 504481 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAGGCCTCGAAACATCAGAGCTGATTTGGCCTACAGCATAGACAGGTGGTTGTAATGCTGTAGCTGATCAATAAATACACCTGGATGGACACCTGGTTGTAAGACTAGGCTGGACGTAAAATACGCCTCAAGTCCTGCGTTGAATTAATACCTGATGTAACGCACATCTGAGACTAAATCTTACGCCTAGTCAAAGGTAGGTGTAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU303397 lncRNA downstream 66712 437334 ~ 437563 (-) True G267339
TU303366 lncRNA downstream 83115 420939 ~ 421160 (-) True G267310
TU303350 lncRNA downstream 91145 412902 ~ 413130 (-) True G267294
TU303348 lncRNA downstream 92129 411269 ~ 412146 (-) True G267292
TU303329 lncRNA downstream 105116 398942 ~ 399159 (-) True G267273
TU303801 lncRNA upstream 7213 511694 ~ 512168 (-) True G267721
TU303802 lncRNA upstream 8032 512513 ~ 512750 (-) True G267722
TU303809 lncRNA upstream 20398 524879 ~ 525584 (-) True G267728
TU303821 lncRNA upstream 43519 548000 ~ 549479 (-) True G267739
TU303865 lncRNA upstream 87061 591542 ~ 591749 (-) True G267770
CI01000065_00444905_00447425.mRNA mRNA downstream 56850 444680 ~ 447425 (-) True CI01000065_00444905_00447425
CI01000065_00330696_00340165.mRNA mRNA downstream 163503 330592 ~ 340772 (-) True CI01000065_00330696_00340165
CI01000065_00253168_00255665.mRNA mRNA downstream 248565 252691 ~ 255710 (-) True CI01000065_00253168_00255665
CI01000065_00120723_00133111.mRNA mRNA downstream 371164 120406 ~ 133111 (-) True CI01000065_00120723_00133111
CI01000065_00097164_00097583.mRNA mRNA downstream 406685 96904 ~ 97590 (-) True CI01000065_00097164_00097583
CI01000065_00563411_00579174.mRNA mRNA upstream 58367 562848 ~ 580083 (-) False CI01000065_00563411_00579174
CI01000065_00622545_00624625.mRNA mRNA upstream 117642 622123 ~ 624625 (-) False CI01000065_00622545_00624625
CI01000065_00768127_00769942.mRNA mRNA upstream 263091 767572 ~ 770151 (-) True CI01000065_00768127_00769942
CI01000065_00782736_00793467.mRNA mRNA upstream 278255 782736 ~ 793467 (-) False CI01000065_00782736_00793467
CI01000065_00843437_00865598.mRNA mRNA upstream 338951 843432 ~ 865598 (-) True CI01000065_00843437_00865598
TU303067 other downstream 449888 54287 ~ 54387 (-) True G267025
TU303066 other downstream 458188 43039 ~ 46087 (-) True G267024
TU303798 other upstream 49870 554351 ~ 556828 (-) True G267718
TU303796 other upstream 49987 554468 ~ 556828 (-) True G267718
TU303828 other upstream 117951 622432 ~ 624657 (-) True CI01000065_00622545_00624625
TU303837 other upstream 278216 783538 ~ 783661 (-) True G267748
TU305637 other upstream 2803962 3308443 ~ 3312404 (-) False G269348

Expression Profile