RNA id: TU303954



Basic Information


Item Value
RNA id TU303954
length 217
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G267852
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 798026 ~ 798242 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGCTTCCAGGGTTCCTACACATTTTCCATTTCAAAATTCCATACTTTTCCATACTCAAATTTACAGACCTCCTTCCAAACGATTTCTGCCATTGGTAAGCCTCTGTCTCCTTTTTCTATCTTTTCTCTGCTTCGTGTTTGTAGACTAGTGATTTTTAGTGATTTTAGTGTTTGATTGTTGAAATAAAGTTTTGTACTTAGTATTCACGTCTAGGCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303952 lncRNA downstream 1059 796256 ~ 796967 (-) True G267850
TU303893 lncRNA downstream 131123 666609 ~ 666903 (-) True G267791
TU303892 lncRNA downstream 136343 661271 ~ 661683 (-) True G267790
TU303890 lncRNA downstream 137178 657131 ~ 660848 (-) True G267789
TU303889 lncRNA downstream 142392 655416 ~ 655634 (-) True G267788
TU303955 lncRNA upstream 613 798855 ~ 799073 (-) True G267853
TU303847 lncRNA upstream 12520 810762 ~ 811315 (-) True G267752
TU303958 lncRNA upstream 27141 825383 ~ 986069 (-) True G267856
TU303965 lncRNA upstream 79548 877790 ~ 880006 (-) True G267863
TU304030 lncRNA upstream 237847 1036089 ~ 1036352 (-) True G267926
CI01000065_00782736_00793467.mRNA mRNA downstream 4559 782736 ~ 793467 (-) False CI01000065_00782736_00793467
CI01000065_00768127_00769942.mRNA mRNA downstream 27875 767572 ~ 770151 (-) True CI01000065_00768127_00769942
CI01000065_00622545_00624625.mRNA mRNA downstream 173401 622123 ~ 624625 (-) False CI01000065_00622545_00624625
CI01000065_00563411_00579174.mRNA mRNA downstream 217943 562848 ~ 580083 (-) False CI01000065_00563411_00579174
CI01000065_00444905_00447425.mRNA mRNA downstream 350601 444680 ~ 447425 (-) True CI01000065_00444905_00447425
CI01000065_00843437_00865598.mRNA mRNA upstream 45190 843432 ~ 865598 (-) True CI01000065_00843437_00865598
CI01000065_00869870_00870423.mRNA mRNA upstream 70196 868438 ~ 870423 (-) True CI01000065_00869870_00870423
CI01000065_00906591_00915144.mRNA mRNA upstream 107150 905392 ~ 915144 (-) True CI01000065_00906591_00915144
CI01000065_01017206_01031155.mRNA mRNA upstream 218454 1016696 ~ 1031678 (-) True CI01000065_01017206_01031155
CI01000065_01037474_01041412.mRNA mRNA upstream 238922 1037164 ~ 1041412 (-) True CI01000065_01037474_01041412
TU303837 other downstream 14365 783538 ~ 783661 (-) True G267748
TU303828 other downstream 173369 622432 ~ 624657 (-) True CI01000065_00622545_00624625
TU303796 other downstream 217999 554468 ~ 556828 (-) True G267718
TU303798 other downstream 233812 554351 ~ 556828 (-) True G267718
TU303067 other downstream 743639 54287 ~ 54387 (-) True G267025
TU305637 other upstream 2510201 3308443 ~ 3312404 (-) False G269348
TU305628 other upstream 2510546 3308788 ~ 3312404 (-) False G269348
TU305632 other upstream 2510546 3308788 ~ 3312480 (-) True G269348
TU306020 other upstream 2975638 3773880 ~ 3774294 (-) True G269679
TU305995 other upstream 2994881 3807558 ~ 3810160 (-) False G269656

Expression Profile