RNA id: TU304030


Basic Information

Item Value
RNA id TU304030
length 264
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G267926
representative True

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 1036089 ~ 1036352 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAACATTTGGAATTTGAAGATCAAGGTAAATTGTATTTAATTTGTCTACCGGAAAACATGCAAGTATCTTCTGTTGCTTCTGAAGGGCAGTACTAAATGAAAAAAAAAAAAAAAAAAAAAAAATGATATTCAAGCGAAATAAGAAAAATTTGGACCTCTTCATCCTGTTCAAAAGCTGGAAATCTGAAGCATTTTTGGGACCTGGAGGATTTTTCTGAAGAACAGAGCTCAGTTTAACTGCTCAGAACAAACAAGGGACTCATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU303958 lncRNA downstream 50020 825383 ~ 986069 (-) True G267856
TU303965 lncRNA downstream 156083 877790 ~ 880006 (-) True G267863
TU303847 lncRNA downstream 224774 810762 ~ 811315 (-) True G267752
TU303955 lncRNA downstream 237016 798855 ~ 799073 (-) True G267853
TU303954 lncRNA downstream 237847 798026 ~ 798242 (-) True G267852
TU304049 lncRNA upstream 42730 1079082 ~ 1079359 (-) True G267944
TU304051 lncRNA upstream 46646 1082998 ~ 1083361 (-) True G267946
TU304063 lncRNA upstream 148721 1185073 ~ 1185374 (-) True CI01000065_01173590_01277821
TU304104 lncRNA upstream 294718 1331070 ~ 1331343 (-) True G267997
TU304209 lncRNA upstream 329624 1365976 ~ 1366304 (-) True G268087
CI01000065_01017206_01031155.mRNA mRNA downstream 4411 1016696 ~ 1031678 (-) True CI01000065_01017206_01031155
CI01000065_00906591_00915144.mRNA mRNA downstream 120945 905392 ~ 915144 (-) True CI01000065_00906591_00915144
CI01000065_00869870_00870423.mRNA mRNA downstream 165666 868438 ~ 870423 (-) True CI01000065_00869870_00870423
CI01000065_00843437_00865598.mRNA mRNA downstream 170491 843432 ~ 865598 (-) True CI01000065_00843437_00865598
CI01000065_00782736_00793467.mRNA mRNA downstream 242622 782736 ~ 793467 (-) False CI01000065_00782736_00793467
CI01000065_01037474_01041412.mRNA mRNA upstream 812 1037164 ~ 1041412 (-) True CI01000065_01037474_01041412
CI01000065_01103779_01119916.mRNA mRNA upstream 67192 1103544 ~ 1120757 (-) True CI01000065_01103779_01119916
CI01000065_01148241_01167007.mRNA mRNA upstream 111522 1147874 ~ 1167007 (-) True CI01000065_01148241_01167007
CI01000065_01173590_01277821.mRNA mRNA upstream 137163 1173515 ~ 1277821 (-) False CI01000065_01173590_01277821
CI01000065_01297837_01321136.mRNA mRNA upstream 261447 1297799 ~ 1321136 (-) True CI01000065_01297837_01321136
TU303837 other downstream 252428 783538 ~ 783661 (-) True G267748
TU303828 other downstream 411432 622432 ~ 624657 (-) True CI01000065_00622545_00624625
TU303796 other downstream 456062 554468 ~ 556828 (-) True G267718
TU303798 other downstream 471875 554351 ~ 556828 (-) True G267718
TU303067 other downstream 981702 54287 ~ 54387 (-) True G267025
TU305637 other upstream 2272091 3308443 ~ 3312404 (-) False G269348
TU305628 other upstream 2272436 3308788 ~ 3312404 (-) False G269348
TU305632 other upstream 2272436 3308788 ~ 3312480 (-) True G269348
TU306020 other upstream 2737528 3773880 ~ 3774294 (-) True G269679
TU305995 other upstream 2756771 3807558 ~ 3810160 (-) False G269656

Expression Profile