RNA id: TU303653



Basic Information


Item Value
RNA id TU303653
length 503
RNA type TUCP
GC content 0.45
exon number 1
gene id G267577
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 1082153 ~ 1082655 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGCTGGAGGACCAATTTGCAACTTATTAGGTCAGTTGGCAACATGATTGGGTATAAAAAGAGCCTCTCAGAGTGGCAGTGTCTCTCAGAAGTCAAGATGGGCAGAGGATCACCAATTCCCCCAATGCTGCGGCGAAAAATAGTGGAGCAATATCAGAAAGGAGTTTCTCAGAGAAAAATTGCAAAGAGTTTGAAGTTATCATCATCTACAGTGCATAATATCATCCAAAGATTCAGAGAATCTGGAACAATCTCTGTGCGTAAGGGTCAAGGCCGGAAAACCATACTGGATGCCCGTGATCTTCGGGCCCTTAGACGGCACTGCATCACATACAGGAATGCTACTGTAATGGAAATCACAACATGGGCTCAGGAATACTTCCAGAAAACATTGTCGGTGAACACTATCCACCGTGCCATTTGCCGTTGCCGGCTAAAACTCTCTAGGTCAAAAAAGAAGCCATATCTAAACATGATCCAGAAGCGCAGGCGTTTTCTCTGGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303650 lncRNA upstream 10099 1071804 ~ 1072054 (+) True G267574
TU303647 lncRNA upstream 11935 1069831 ~ 1070218 (+) False G267573
TU303648 lncRNA upstream 12062 1069831 ~ 1070091 (+) True G267573
TU303637 lncRNA upstream 39283 1042464 ~ 1042870 (+) True G267565
TU303626 lncRNA upstream 50377 1017850 ~ 1031776 (+) True G267557
TU303631 lncRNA downstream 40648 1123303 ~ 1124325 (+) True G267561
TU304138 lncRNA downstream 284574 1367229 ~ 1416137 (+) True G268021
TU304139 lncRNA downstream 289945 1372600 ~ 1423535 (+) True G268022
TU304132 lncRNA downstream 292695 1375350 ~ 1400757 (+) True G268017
TU304131 lncRNA downstream 322139 1404794 ~ 1412241 (+) True G268016
CI01000065_01076737_01078446.mRNA mRNA upstream 2565 1076737 ~ 1079588 (+) True CI01000065_01076737_01078446
CI01000065_00873636_00877487.mRNA mRNA upstream 204666 873636 ~ 877487 (+) True CI01000065_00873636_00877487
CI01000065_00800809_00808759.mRNA mRNA upstream 273279 799876 ~ 808874 (+) True CI01000065_00800809_00808759
CI01000065_00750437_00764088.mRNA mRNA upstream 317856 750437 ~ 764297 (+) True CI01000065_00750437_00764088
CI01000065_00633526_00695106.mRNA mRNA upstream 387047 633526 ~ 695106 (+) True CI01000065_00633526_00695106
CI01000065_01452148_01608735.mRNA mRNA downstream 369493 1452148 ~ 1608735 (+) True CI01000065_01452148_01608735
CI01000065_01867964_01868983.mRNA mRNA downstream 785133 1867788 ~ 1869813 (+) True CI01000065_01867964_01868983
CI01000065_01938179_01949512.mRNA mRNA downstream 855430 1938085 ~ 1950751 (+) True CI01000065_01938179_01949512
CI01000065_02222213_02282352.mRNA mRNA downstream 1139374 2222029 ~ 2282432 (+) True CI01000065_02222213_02282352
CI01000065_02442834_02444552.mRNA mRNA downstream 1359004 2441659 ~ 2445951 (+) True CI01000065_02442834_02444552
TU303494 other upstream 299274 782283 ~ 782879 (+) True G267432
TU302970 other upstream 1037487 43038 ~ 44666 (+) True G266932
TU304676 other downstream 1156504 2239159 ~ 2239998 (+) True G268525
TU304991 other downstream 1526252 2608907 ~ 2638205 (+) True G268805
TU305428 other downstream 2376302 3458957 ~ 3462928 (+) True G269181
TU305478 other downstream 2470149 3552804 ~ 3553124 (+) False G269225

Expression Profile