RNA id: TU304104


Basic Information

Item Value
RNA id TU304104
length 274
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G267997
representative True

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 1331070 ~ 1331343 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TATATATATATATATATATATATATATATACCGATCAGGCATAACATTATGAGCACTGACAGTGAAGTGAATAACACTGATTATCTCTTCATCACGGCACCTGTTAGTGGGTGGATATATTAGGCAGCAAGTGAACATTTTGTCCTCAAAGTTGATGTGTTAGAAGCAGGAAAAATGGGCAAGCGTAAGGATTTGAGCGAGTTTGAGAAGGGCCAAATTGTGATGGCTAGACGACTGGGTCAGAGCATCTCCAAAACTGCAGCTCTTGTGGGGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU304063 lncRNA downstream 145696 1185073 ~ 1185374 (-) True CI01000065_01173590_01277821
TU304051 lncRNA downstream 247709 1082998 ~ 1083361 (-) True G267946
TU304049 lncRNA downstream 251711 1079082 ~ 1079359 (-) True G267944
TU304030 lncRNA downstream 294718 1036089 ~ 1036352 (-) True G267926
TU303958 lncRNA downstream 345001 825383 ~ 986069 (-) True G267856
TU304209 lncRNA upstream 34633 1365976 ~ 1366304 (-) True G268087
TU304217 lncRNA upstream 120738 1452081 ~ 1463686 (-) True G268095
TU304276 lncRNA upstream 272119 1603462 ~ 1681220 (-) True G268151
TU304373 lncRNA upstream 426271 1757614 ~ 1757990 (-) True G268237
TU304390 lncRNA upstream 488112 1819455 ~ 1819714 (-) True G268252
CI01000065_01297837_01321136.mRNA mRNA downstream 9934 1297799 ~ 1321136 (-) True CI01000065_01297837_01321136
CI01000065_01173590_01277821.mRNA mRNA downstream 53249 1173515 ~ 1277821 (-) False CI01000065_01173590_01277821
CI01000065_01148241_01167007.mRNA mRNA downstream 164063 1147874 ~ 1167007 (-) True CI01000065_01148241_01167007
CI01000065_01103779_01119916.mRNA mRNA downstream 210313 1103544 ~ 1120757 (-) True CI01000065_01103779_01119916
CI01000065_01037474_01041412.mRNA mRNA downstream 289658 1037164 ~ 1041412 (-) True CI01000065_01037474_01041412
CI01000065_01373412_01382125.mRNA mRNA upstream 41931 1373274 ~ 1382947 (-) True CI01000065_01373412_01382125
CI01000065_01911879_01931555.mRNA mRNA upstream 580169 1911512 ~ 1931555 (-) True CI01000065_01911879_01931555
CI01000065_01955024_01969974.mRNA mRNA upstream 621435 1952778 ~ 1970223 (-) True CI01000065_01955024_01969974
CI01000065_01982908_01987337.mRNA mRNA upstream 651060 1982403 ~ 1987488 (-) False CI01000065_01982908_01987337
CI01000065_02288372_02357728.mRNA mRNA upstream 957029 2288372 ~ 2357728 (-) False CI01000065_02288372_02357728
TU303837 other downstream 547409 783538 ~ 783661 (-) True G267748
TU303828 other downstream 706413 622432 ~ 624657 (-) True CI01000065_00622545_00624625
TU303796 other downstream 751043 554468 ~ 556828 (-) True G267718
TU303798 other downstream 766856 554351 ~ 556828 (-) True G267718
TU303067 other downstream 1276683 54287 ~ 54387 (-) True G267025
TU305637 other upstream 1977100 3308443 ~ 3312404 (-) False G269348
TU305628 other upstream 1977445 3308788 ~ 3312404 (-) False G269348
TU305632 other upstream 1977445 3308788 ~ 3312480 (-) True G269348
TU306020 other upstream 2442537 3773880 ~ 3774294 (-) True G269679
TU305995 other upstream 2461780 3807558 ~ 3810160 (-) False G269656

Expression Profile