RNA id: TU304394



Basic Information


Item Value
RNA id TU304394
length 206
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G268256
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 1831429 ~ 1831634 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CCGTGTACACCACACCATCTTCCAGGATGAGTGGAAGGGGAGGTTCCTCTGTCGGGCCAGGCTCTGTGGAGGGAACTGATGGTTCGGAGTGACAGATGGAATGTGGGGTGAATTCTGTAATGTGCAGGTAACTGGAGCTGGTAAGTGACAGGATTGATTTGTCGTGTGATGGTGAAGGGGCCAACGTATCTGGGACTCAGCTTTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU304356 lncRNA upstream 52144 1776226 ~ 1779285 (+) True G268222
TU304205 lncRNA upstream 131476 1698719 ~ 1699953 (+) True G268083
TU304139 lncRNA upstream 407894 1372600 ~ 1423535 (+) True G268022
TU304138 lncRNA upstream 415292 1367229 ~ 1416137 (+) True G268021
TU304419 lncRNA downstream 124731 1956365 ~ 1960880 (+) False G268274
TU304417 lncRNA downstream 128661 1960295 ~ 1960880 (+) True G268274
TU304412 lncRNA downstream 140730 1972364 ~ 1974589 (+) True G268270
TU304446 lncRNA downstream 143877 1975511 ~ 1982735 (+) True G268301
TU304509 lncRNA downstream 169437 2001071 ~ 2001301 (+) True G268361
CI01000065_01452148_01608735.mRNA mRNA upstream 222694 1452148 ~ 1608735 (+) True CI01000065_01452148_01608735
CI01000065_01076737_01078446.mRNA mRNA upstream 751841 1076737 ~ 1079588 (+) True CI01000065_01076737_01078446
CI01000065_00873636_00877487.mRNA mRNA upstream 953942 873636 ~ 877487 (+) True CI01000065_00873636_00877487
CI01000065_00800809_00808759.mRNA mRNA upstream 1022555 799876 ~ 808874 (+) True CI01000065_00800809_00808759
CI01000065_00750437_00764088.mRNA mRNA upstream 1067132 750437 ~ 764297 (+) True CI01000065_00750437_00764088
CI01000065_01867964_01868983.mRNA mRNA downstream 36154 1867788 ~ 1869813 (+) True CI01000065_01867964_01868983
CI01000065_01938179_01949512.mRNA mRNA downstream 106451 1938085 ~ 1950751 (+) True CI01000065_01938179_01949512
CI01000065_02222213_02282352.mRNA mRNA downstream 390395 2222029 ~ 2282432 (+) True CI01000065_02222213_02282352
CI01000065_02442834_02444552.mRNA mRNA downstream 610025 2441659 ~ 2445951 (+) True CI01000065_02442834_02444552
CI01000065_02562189_02562709.mRNA mRNA downstream 730555 2562189 ~ 2562738 (+) True CI01000065_02562189_02562709
TU303653 other upstream 748774 1082153 ~ 1082655 (+) True G267577
TU303494 other upstream 1048550 782283 ~ 782879 (+) True G267432
TU302970 other upstream 1786763 43038 ~ 44666 (+) True G266932
TU304676 other downstream 407525 2239159 ~ 2239998 (+) True G268525
TU304991 other downstream 777273 2608907 ~ 2638205 (+) True G268805
TU305428 other downstream 1627323 3458957 ~ 3462928 (+) True G269181
TU305478 other downstream 1721170 3552804 ~ 3553124 (+) False G269225

Expression Profile