RNA id: TU304760



Basic Information


Item Value
RNA id TU304760
length 698
lncRNA type inter_gene
GC content 0.42
exon number 3
gene id G268603
representative False

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 2464783 ~ 2530305 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGTACTGCAGAAGTTCAGAAAAATGTGGTATCTGTGACGTCCTCAAACATCTTCTTTCTTTGCATCTGTTAAGCTCAATGTTTGCTTCCACCACGCAGTGAGTTGTTTCCCTGCTTCTTCATGTTCGTCATCAATCAACTGTATGGAATGAAGGCAGACAGCAACAGCGCTTGGGATCGCATCCAGGGTCACTGCCCTTCTAACAGCTGGGATTCGGATGCCCTTCTCATGAGTACAACAGCTCTGGCGAGGGCACGACTGCGGCCGCGGCTACTGGGCTCGCTTCAACTAAAAGATAAATGACAATAGACAATGGAGCCTGTCATTTCTCAGGTTAAAGGCTTTTTGCTGAAGTAAACAGTCTCAGCTGGTTGTCAGTGGTAGTTACACAGCCATTCAAAGAAAGTGTAAACAGAACAAAAGCTCAGATGAGGTTAAACTGATATTTATGTCCCATTGAATCTTTTTTGGTTGAATTTCTCTGGCCCTCCCTGATCCCCAAACACTCTTTTAATGTTATAACAGCGTTTTAGTTTGTTCGTGGATGATTTTGGAAGTCAAGCAATCGACAGAAATGTCCAAATATCTGTGTCTGTGATTAGGCATTGTGCTCTAATCTATTAATAATTCAACCTCATCCAGCTTAGACACTTCAAAAAGAATATAATCAATCACATGAAGGAGAAAATAAAGGCCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU304733 lncRNA upstream 67076 2397197 ~ 2397707 (+) True G268576
TU304653 lncRNA upstream 313835 2150748 ~ 2150948 (+) True G268502
TU304622 lncRNA upstream 373673 2090845 ~ 2091110 (+) True G268472
TU304619 lncRNA upstream 374793 2089448 ~ 2089990 (+) True G268469
TU304618 lncRNA upstream 375388 2089035 ~ 2089395 (+) True G268468
TU304795 lncRNA downstream 6839 2537144 ~ 2537375 (+) True G268635
TU304798 lncRNA downstream 8685 2538990 ~ 2539204 (+) True G268638
TU304801 lncRNA downstream 15092 2545397 ~ 2545668 (+) True G268641
TU304807 lncRNA downstream 33106 2563411 ~ 2563637 (+) True G268647
TU304972 lncRNA downstream 57122 2587427 ~ 2587726 (+) True G268786
CI01000065_02442834_02444552.mRNA mRNA upstream 18832 2441659 ~ 2445951 (+) True CI01000065_02442834_02444552
CI01000065_02222213_02282352.mRNA mRNA upstream 182351 2222029 ~ 2282432 (+) True CI01000065_02222213_02282352
CI01000065_01938179_01949512.mRNA mRNA upstream 514032 1938085 ~ 1950751 (+) True CI01000065_01938179_01949512
CI01000065_01867964_01868983.mRNA mRNA upstream 594970 1867788 ~ 1869813 (+) True CI01000065_01867964_01868983
CI01000065_01452148_01608735.mRNA mRNA upstream 856048 1452148 ~ 1608735 (+) True CI01000065_01452148_01608735
CI01000065_02562189_02562709.mRNA mRNA downstream 31884 2562189 ~ 2562738 (+) True CI01000065_02562189_02562709
CI01000065_02714893_02755256.mRNA mRNA downstream 183136 2713441 ~ 2755370 (+) True CI01000065_02714893_02755256
CI01000065_02770419_02775297.mRNA mRNA downstream 239744 2770049 ~ 2776165 (+) True CI01000065_02770419_02775297
CI01000065_02783579_02788578.mRNA mRNA downstream 253010 2783315 ~ 2788866 (+) True CI01000065_02783579_02788578
CI01000065_02806198_02813320.mRNA mRNA downstream 275893 2806198 ~ 2813722 (+) True CI01000065_02806198_02813320
TU304676 other upstream 224785 2239159 ~ 2239998 (+) True G268525
TU303653 other upstream 1382128 1082153 ~ 1082655 (+) True G267577
TU303494 other upstream 1681904 782283 ~ 782879 (+) True G267432
TU302970 other upstream 2420117 43038 ~ 44666 (+) True G266932
TU304991 other downstream 78602 2608907 ~ 2638205 (+) True G268805
TU305428 other downstream 928652 3458957 ~ 3462928 (+) True G269181
TU305478 other downstream 1022499 3552804 ~ 3553124 (+) False G269225

Expression Profile