RNA id: TU305944



Basic Information


Item Value
RNA id TU305944
length 457
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G269607
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3859523 ~ 3859979 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATCTGTGGGATGTGCTGAACAAACAAGTCTGATCCATGGAGGCTCCACCTCACAACTTGCAGGACTTAAAGGATCTGCTGCTAACATCTTGGTGCCAGATACCACAGCACACCTTCAGGGGTCTAGAGGAGTCCATGCCTCGACGGGTCAGGGCTGTTTTGGCAGCAAAAGGGGGACCAACACAATATTAGGAAGTTGGTCATAATGTTATGCCTGATCAGTGTACTCACACCTGTAACCGTACAACAGTTGAATTCAGTATTAATGTGTCATGTTGTGACACTTCTCGACAACCATAAACGGCTAAACTTCGCTTTACATCACTAAATAGCGTCTTCCTGGCTTACACTCACTATTTTCACAGTACTGCATATTTCTTTGTCACTCTGACATGTAAACGATATAGTAAATCTTAACCAAGCACACATTTCAACCGTCTTACCGCCCAGCCCTTTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU305942 lncRNA upstream 3247 3855999 ~ 3856276 (+) True G269605
TU305929 lncRNA upstream 34712 3824592 ~ 3824811 (+) True G269592
TU305900 lncRNA upstream 55849 3793245 ~ 3803674 (+) True G269567
TU305902 lncRNA upstream 56880 3798157 ~ 3802643 (+) True G269569
TU305924 lncRNA upstream 72089 3787197 ~ 3787434 (+) True G269587
TU306087 lncRNA downstream 43400 3903379 ~ 3903627 (+) True G269733
TU306088 lncRNA downstream 44112 3904091 ~ 3904490 (+) True G269734
TU306100 lncRNA downstream 49698 3909677 ~ 3909913 (+) True G269746
TU306144 lncRNA downstream 82374 3942353 ~ 3942678 (+) True G269790
TU306145 lncRNA downstream 83002 3942981 ~ 3943191 (+) True G269791
CI01000065_03815841_03816140.mRNA mRNA upstream 42933 3812858 ~ 3816590 (+) True CI01000065_03815841_03816140
CI01000065_03709249_03716992.mRNA mRNA upstream 141615 3709144 ~ 3717908 (+) True CI01000065_03709249_03716992
CI01000065_03692428_03692874.mRNA mRNA upstream 166103 3692428 ~ 3693420 (+) True CI01000065_03692428_03692874
CI01000065_03486630_03494354.mRNA mRNA upstream 363783 3486567 ~ 3495740 (+) True CI01000065_03486630_03494354
CI01000065_03398558_03399971.mRNA mRNA upstream 459098 3398558 ~ 3400425 (+) True CI01000065_03398558_03399971
CI01000065_03980525_03983765.mRNA mRNA downstream 120546 3980525 ~ 3984923 (+) True CI01000065_03980525_03983765
CI01000065_03986974_04006773.mRNA mRNA downstream 126995 3986974 ~ 4007259 (+) True CI01000065_03986974_04006773
CI01000065_04008274_04010105.mRNA mRNA downstream 148295 4008274 ~ 4010194 (+) True CI01000065_04008274_04010105
CI01000065_04044257_04051771.mRNA mRNA downstream 184278 4044257 ~ 4052283 (+) True CI01000065_04044257_04051771
CI01000065_04081314_04103789.mRNA mRNA downstream 221335 4081314 ~ 4103961 (+) True CI01000065_04081314_04103789
TU305478 other upstream 306399 3552804 ~ 3553124 (+) False G269225
TU305428 other upstream 396595 3458957 ~ 3462928 (+) True G269181
TU304991 other upstream 1221318 2608907 ~ 2638205 (+) True G268805
TU304676 other upstream 1619525 2239159 ~ 2239998 (+) True G268525
TU303653 other upstream 2776868 1082153 ~ 1082655 (+) True G267577

Expression Profile