RNA id: TU306145



Basic Information


Item Value
RNA id TU306145
length 211
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G269791
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3942981 ~ 3943191 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CAGGATAAAATCCACAAGGTTCTGAGGTTCAGTCCGAACATGTCAGTGACGTCTCCGCATCCAAATTTCGAGCCAGAATCATCACATTCTCTGTGGCATGCACAAATACGTATTTAGCCTGTGTTTGTTGTGTACACTCTGTGCAGCTTGTAGGTCTCTGGCTAACCAGCTAACCGCAATAGGTGTTCACTCGCAATTGTCTAGAAATGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU306144 lncRNA upstream 303 3942353 ~ 3942678 (+) True G269790
TU306100 lncRNA upstream 33068 3909677 ~ 3909913 (+) True G269746
TU306088 lncRNA upstream 38491 3904091 ~ 3904490 (+) True G269734
TU306087 lncRNA upstream 39354 3903379 ~ 3903627 (+) True G269733
TU305944 lncRNA upstream 83002 3859523 ~ 3859979 (+) True G269607
TU306160 lncRNA downstream 19750 3962941 ~ 3963163 (+) True G269806
TU306165 lncRNA downstream 25237 3968428 ~ 3968641 (+) True G269811
TU306168 lncRNA downstream 32884 3976075 ~ 3976395 (+) True G269814
TU306190 lncRNA downstream 69057 4012248 ~ 4012477 (+) True G269833
TU306268 lncRNA downstream 290499 4233690 ~ 4234687 (+) True G269907
CI01000065_03815841_03816140.mRNA mRNA upstream 126391 3812858 ~ 3816590 (+) True CI01000065_03815841_03816140
CI01000065_03709249_03716992.mRNA mRNA upstream 225073 3709144 ~ 3717908 (+) True CI01000065_03709249_03716992
CI01000065_03692428_03692874.mRNA mRNA upstream 249561 3692428 ~ 3693420 (+) True CI01000065_03692428_03692874
CI01000065_03486630_03494354.mRNA mRNA upstream 447241 3486567 ~ 3495740 (+) True CI01000065_03486630_03494354
CI01000065_03398558_03399971.mRNA mRNA upstream 542556 3398558 ~ 3400425 (+) True CI01000065_03398558_03399971
CI01000065_03980525_03983765.mRNA mRNA downstream 37334 3980525 ~ 3984923 (+) True CI01000065_03980525_03983765
CI01000065_03986974_04006773.mRNA mRNA downstream 43783 3986974 ~ 4007259 (+) True CI01000065_03986974_04006773
CI01000065_04008274_04010105.mRNA mRNA downstream 65083 4008274 ~ 4010194 (+) True CI01000065_04008274_04010105
CI01000065_04044257_04051771.mRNA mRNA downstream 101066 4044257 ~ 4052283 (+) True CI01000065_04044257_04051771
CI01000065_04081314_04103789.mRNA mRNA downstream 138123 4081314 ~ 4103961 (+) True CI01000065_04081314_04103789
TU305478 other upstream 389857 3552804 ~ 3553124 (+) False G269225
TU305428 other upstream 480053 3458957 ~ 3462928 (+) True G269181
TU304991 other upstream 1304776 2608907 ~ 2638205 (+) True G268805
TU304676 other upstream 1702983 2239159 ~ 2239998 (+) True G268525
TU303653 other upstream 2860326 1082153 ~ 1082655 (+) True G267577

Expression Profile