RNA id: TU306168



Basic Information


Item Value
RNA id TU306168
length 321
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G269814
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3976075 ~ 3976395 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AATATTGTTGCCATGGCAACACGTCAAACTTTAATAATATTCTTGGGTGTTTCTGAGGCTCTTAACATGCTTTAAATTGCATGAAACTCGACACACATGTCAGGATTGTCATCCAGTAGACATGGGCAAAGCCTTAGAAATGGGTGGGGAGAAGGGCCTCTATAGCGCCACCTTTTGACAAAAGTGGGGGGTTAGTTTAACCAACAGTCACCAAACTCGGTACACATATTGTTCTAAGTAAGCCAGACAACTTTCTAATTTACAGTCATAGCTCTGACCAACCGGAAGTCAGCTATTTTGTTTTGAATGTGGATTTTTCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU306165 lncRNA upstream 7434 3968428 ~ 3968641 (+) True G269811
TU306160 lncRNA upstream 12912 3962941 ~ 3963163 (+) True G269806
TU306145 lncRNA upstream 32884 3942981 ~ 3943191 (+) True G269791
TU306144 lncRNA upstream 33397 3942353 ~ 3942678 (+) True G269790
TU306100 lncRNA upstream 66162 3909677 ~ 3909913 (+) True G269746
TU306190 lncRNA downstream 35853 4012248 ~ 4012477 (+) True G269833
TU306268 lncRNA downstream 257295 4233690 ~ 4234687 (+) True G269907
TU306269 lncRNA downstream 258660 4235055 ~ 4235333 (+) True G269908
TU306273 lncRNA downstream 267804 4244199 ~ 4244541 (+) True G269912
TU306276 lncRNA downstream 278296 4254691 ~ 4254968 (+) True G269915
CI01000065_03815841_03816140.mRNA mRNA upstream 159485 3812858 ~ 3816590 (+) True CI01000065_03815841_03816140
CI01000065_03709249_03716992.mRNA mRNA upstream 258167 3709144 ~ 3717908 (+) True CI01000065_03709249_03716992
CI01000065_03692428_03692874.mRNA mRNA upstream 282655 3692428 ~ 3693420 (+) True CI01000065_03692428_03692874
CI01000065_03486630_03494354.mRNA mRNA upstream 480335 3486567 ~ 3495740 (+) True CI01000065_03486630_03494354
CI01000065_03398558_03399971.mRNA mRNA upstream 575650 3398558 ~ 3400425 (+) True CI01000065_03398558_03399971
CI01000065_03980525_03983765.mRNA mRNA downstream 4130 3980525 ~ 3984923 (+) True CI01000065_03980525_03983765
CI01000065_03986974_04006773.mRNA mRNA downstream 10579 3986974 ~ 4007259 (+) True CI01000065_03986974_04006773
CI01000065_04008274_04010105.mRNA mRNA downstream 31879 4008274 ~ 4010194 (+) True CI01000065_04008274_04010105
CI01000065_04044257_04051771.mRNA mRNA downstream 67862 4044257 ~ 4052283 (+) True CI01000065_04044257_04051771
CI01000065_04081314_04103789.mRNA mRNA downstream 104919 4081314 ~ 4103961 (+) True CI01000065_04081314_04103789
TU305478 other upstream 422951 3552804 ~ 3553124 (+) False G269225
TU305428 other upstream 513147 3458957 ~ 3462928 (+) True G269181
TU304991 other upstream 1337870 2608907 ~ 2638205 (+) True G268805
TU304676 other upstream 1736077 2239159 ~ 2239998 (+) True G268525
TU303653 other upstream 2893420 1082153 ~ 1082655 (+) True G267577

Expression Profile