RNA id: TU306655



Basic Information


Item Value
RNA id TU306655
length 255
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G270229
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 4231366 ~ 4231620 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGCAACTTTCATGAAGTAAAATCACTAAAAGGCTTCCTTCCGCTGACCGTGAACAGCAACAGAAGTTACATTATTACGCCATTAGATGGCAGCAAAGATTATCTTTATGAGCGAGTCACTCAGTCGCAAAGACTTTTATATTGAAACTTGTTGTGAACATGGAACAAGACGCAAATGACAAATGCTTTGACTAGCGCTGTCAGTGTCAGCATGGCACAGGAAAACCCATTAAATGTTAAAAGGACAAGATTGCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU306654 lncRNA downstream 956 4230124 ~ 4230410 (-) True G270228
TU306639 lncRNA downstream 8578 4221926 ~ 4222788 (-) True G270213
TU306643 lncRNA downstream 12352 4215068 ~ 4219014 (-) True G270217
TU306622 lncRNA downstream 26583 4138833 ~ 4204783 (-) True G270197
TU306644 lncRNA downstream 33017 4194753 ~ 4198349 (-) True G270218
TU306684 lncRNA upstream 47378 4278998 ~ 4279380 (-) True G270255
TU306697 lncRNA upstream 67362 4298982 ~ 4314037 (-) True G270268
TU306721 lncRNA upstream 104237 4335857 ~ 4336183 (-) True G270287
TU306722 lncRNA upstream 104587 4336207 ~ 4336464 (-) True G270288
TU306666 lncRNA upstream 139188 4370808 ~ 4371142 (-) True G270240
CI01000065_04178828_04180116.mRNA mRNA downstream 51250 4177958 ~ 4180116 (-) True CI01000065_04178828_04180116
CI01000065_04070422_04072088.mRNA mRNA downstream 159278 4070204 ~ 4072088 (-) True CI01000065_04070422_04072088
CI01000065_04027497_04039742.mRNA mRNA downstream 191624 4026510 ~ 4039742 (-) True CI01000065_04027497_04039742
CI01000065_03944604_03949933.mRNA mRNA downstream 281179 3944581 ~ 3950187 (-) True CI01000065_03944604_03949933
CI01000065_03935077_03938904.mRNA mRNA downstream 292462 3935018 ~ 3938904 (-) True CI01000065_03935077_03938904
CI01000065_04318691_04330504.mRNA mRNA upstream 86815 4318435 ~ 4330782 (-) True CI01000065_04318691_04330504
CI01000065_04470763_04478735.mRNA mRNA upstream 238379 4469999 ~ 4479108 (-) True CI01000065_04470763_04478735
CI01000065_04484009_04501087.mRNA mRNA upstream 252389 4484009 ~ 4501087 (-) True CI01000065_04484009_04501087
CI01000065_04507862_04513517.mRNA mRNA upstream 276242 4507862 ~ 4513517 (-) True CI01000065_04507862_04513517
CI01000065_04657955_04662886.mRNA mRNA upstream 425989 4657609 ~ 4663107 (-) True CI01000065_04657955_04662886
TU305996 other downstream 421123 3807558 ~ 3810243 (-) True G269656
TU305995 other downstream 421206 3807558 ~ 3810160 (-) False G269656
TU306020 other downstream 457072 3773880 ~ 3774294 (-) True G269679
TU305632 other downstream 918886 3308788 ~ 3312480 (-) True G269348
TU305628 other downstream 918962 3308788 ~ 3312404 (-) False G269348

Expression Profile