RNA id: TU306268



Basic Information


Item Value
RNA id TU306268
length 565
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G269907
representative True

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 4233690 ~ 4234687 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACTGAAAAGTATGAACATGAAAAGTATGAGCATGTACAGCACTCAATACTTAGTTGGGGCTCCTTTTGCCTGAATTACTGCAGCAATGCGGCGTGGCATGGAGTCGATCAGTCTGTGGCACTGCCCCGGTGTTATAAGAGCCCAGGTTGCTCTGATAGTGGCCTTCAGCTCTTCTGCATTGTTGGGTCTGGCATATCTTCCTCTTCACAATACCCCATAGATTTTCTATGGGGTTAAGGTCAGGCGAGTTTGCTTGCCAATTAAGAACAGGGATACCATGGTTCTTAAACCAGGTACTGGTAGCTTTGGCACTGTGTGCAGGTGCCAAGTCCTGTTGGAAAATGAAATCTGCATCTCCATAAAGTTGGTCAGCAGCAGGAAGCTTGAAGTGCTCTAAAACTTCCTGGTATACGGCTGTGTTGACCTTGGACCTCAGAAAACACAGTGGACCAACACCAGCAGATGACATGGCACCCCAAACCATCACTGACTGTGGAAACTTTACACTGGACCTCAAGCAACGTGGATTGTGTGCCTCTCCTCTCTTCCTCCAGACTCTGGGACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU306190 lncRNA upstream 221213 4012248 ~ 4012477 (+) True G269833
TU306168 lncRNA upstream 257295 3976075 ~ 3976395 (+) True G269814
TU306165 lncRNA upstream 265049 3968428 ~ 3968641 (+) True G269811
TU306160 lncRNA upstream 270527 3962941 ~ 3963163 (+) True G269806
TU306145 lncRNA upstream 290499 3942981 ~ 3943191 (+) True G269791
TU306269 lncRNA downstream 368 4235055 ~ 4235333 (+) True G269908
TU306273 lncRNA downstream 9512 4244199 ~ 4244541 (+) True G269912
TU306276 lncRNA downstream 20004 4254691 ~ 4254968 (+) True G269915
TU306278 lncRNA downstream 44381 4279068 ~ 4279371 (+) True G269917
TU306280 lncRNA downstream 48903 4283590 ~ 4283878 (+) True G269919
CI01000065_04183838_04222038.mRNA mRNA upstream 11223 4183838 ~ 4222467 (+) True CI01000065_04183838_04222038
CI01000065_04115052_04165049.mRNA mRNA upstream 68261 4112278 ~ 4165429 (+) True CI01000065_04115052_04165049
CI01000065_04081314_04103789.mRNA mRNA upstream 129729 4081314 ~ 4103961 (+) True CI01000065_04081314_04103789
CI01000065_04044257_04051771.mRNA mRNA upstream 181407 4044257 ~ 4052283 (+) True CI01000065_04044257_04051771
CI01000065_04008274_04010105.mRNA mRNA upstream 223496 4008274 ~ 4010194 (+) True CI01000065_04008274_04010105
CI01000065_04247989_04251347.mRNA mRNA downstream 10976 4245663 ~ 4251797 (+) True CI01000065_04247989_04251347
CI01000065_04277095_04282609.mRNA mRNA downstream 41321 4276008 ~ 4283199 (+) True CI01000065_04277095_04282609
CI01000065_04361047_04363753.mRNA mRNA downstream 126250 4360937 ~ 4363839 (+) True CI01000065_04361047_04363753
CI01000065_04520939_04539169.mRNA mRNA downstream 286161 4520848 ~ 4539261 (+) True CI01000065_04520939_04539169
CI01000065_04547859_04555579.mRNA mRNA downstream 313172 4547859 ~ 4555579 (+) True CI01000065_04547859_04555579
TU305478 other upstream 680566 3552804 ~ 3553124 (+) False G269225
TU305428 other upstream 770762 3458957 ~ 3462928 (+) True G269181
TU304991 other upstream 1595485 2608907 ~ 2638205 (+) True G268805
TU304676 other upstream 1993692 2239159 ~ 2239998 (+) True G268525
TU303653 other upstream 3151035 1082153 ~ 1082655 (+) True G267577

Expression Profile