RNA id: TU306276


Basic Information

Item Value
RNA id TU306276
length 278
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G269915
representative True

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 4254691 ~ 4254968 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGTACTTCGGAATCTTGGAAGTATGACCAAAATAAGAATTTTCACTGGAAAATGTCATCTGAACAAGTAAGTAACAAATCTGCCACTTTTGTTCTGACTTTACAATCTCGCTGCCAATGGTGATTAAATCTAATGATCGCTTAGCTCGGATCACGTCAAACCATGCATATTATTATTATTGTTATACTTTGTTCTCAAATTGTTAATGTTAACAACATCAGCATTGCGTGACTATGTGTATTTAGTGTGTACGTTTAGTGCGTTACCTTAGATTGCGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU306273 lncRNA upstream 10150 4244199 ~ 4244541 (+) True G269912
TU306269 lncRNA upstream 19358 4235055 ~ 4235333 (+) True G269908
TU306268 lncRNA upstream 20004 4233690 ~ 4234687 (+) True G269907
TU306190 lncRNA upstream 242214 4012248 ~ 4012477 (+) True G269833
TU306168 lncRNA upstream 278296 3976075 ~ 3976395 (+) True G269814
TU306278 lncRNA downstream 24100 4279068 ~ 4279371 (+) True G269917
TU306280 lncRNA downstream 28622 4283590 ~ 4283878 (+) True G269919
TU306313 lncRNA downstream 78952 4333920 ~ 4334177 (+) True G269948
TU306333 lncRNA downstream 94142 4349110 ~ 4349430 (+) True G269959
TU306337 lncRNA downstream 108986 4363954 ~ 4364248 (+) True G269963
CI01000065_04247989_04251347.mRNA mRNA upstream 2894 4245663 ~ 4251797 (+) True CI01000065_04247989_04251347
CI01000065_04183838_04222038.mRNA mRNA upstream 32224 4183838 ~ 4222467 (+) True CI01000065_04183838_04222038
CI01000065_04115052_04165049.mRNA mRNA upstream 89262 4112278 ~ 4165429 (+) True CI01000065_04115052_04165049
CI01000065_04081314_04103789.mRNA mRNA upstream 150730 4081314 ~ 4103961 (+) True CI01000065_04081314_04103789
CI01000065_04044257_04051771.mRNA mRNA upstream 202408 4044257 ~ 4052283 (+) True CI01000065_04044257_04051771
CI01000065_04277095_04282609.mRNA mRNA downstream 21040 4276008 ~ 4283199 (+) True CI01000065_04277095_04282609
CI01000065_04361047_04363753.mRNA mRNA downstream 105969 4360937 ~ 4363839 (+) True CI01000065_04361047_04363753
CI01000065_04520939_04539169.mRNA mRNA downstream 265880 4520848 ~ 4539261 (+) True CI01000065_04520939_04539169
CI01000065_04547859_04555579.mRNA mRNA downstream 292891 4547859 ~ 4555579 (+) True CI01000065_04547859_04555579
CI01000065_04561164_04574594.mRNA mRNA downstream 306150 4561118 ~ 4574656 (+) True CI01000065_04561164_04574594
TU305478 other upstream 701567 3552804 ~ 3553124 (+) False G269225
TU305428 other upstream 791763 3458957 ~ 3462928 (+) True G269181
TU304991 other upstream 1616486 2608907 ~ 2638205 (+) True G268805
TU304676 other upstream 2014693 2239159 ~ 2239998 (+) True G268525
TU303653 other upstream 3172036 1082153 ~ 1082655 (+) True G267577

Expression Profile