RNA id: CI01000066_02057126_02059813.mRNA


Basic Information

Item Value
RNA id CI01000066_02057126_02059813.mRNA
length 819
RNA type mRNA
GC content 0.46
exon number 3
gene id CI01000066_02057126_02059813
representative True

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2057081 ~ 2059813 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGGACGAACTACGACTGTGGATGGCAACACACAAATGGATTACGGACTGTAATATCATGATCTTCACGGAAACATGGCTCAATAATAACATACGCAGCGCAATTGAGCTGGAGGGTTGCAATGTTTTCCGGGCATACAGAACTACAATGAACTCTGATCTGTACTCCGCACTAAGCAGAGTGGATGCACGTAAGGCAGTTGGTCCTGGCGGTATACCTGGGCATGTGCTTAGAGCCTGTGCTGAACAACTGACACAGGTCTTTAATGACATCTTCAATCAGTCACTGGTCCAGGCTACTGTTCCTACATGTCTGAAGGCAACTATCATTATACCTGTGCCTAAGCACTCTATGGCAGCGTGCCTGAATGATTTCCGCCCTGTTGCACTTAAGCCCATTATTATGAAGTGCTTTGAGAAACTGGTTCTGAGTCACTTCATATCAGGCTTACCATCTACACTGGACCCATACCAGTTTGCTTATCGCTCGAATAGATGGATTCTGAATTTTCTTACCAATCGACCTCGGTCTGTGAGGTTGAGCAGTCACATGTCCTCAACTCTCATCCTGAACACCGGTGTCCCACAGAGTTGTGTGTTGAGTCCAGTACTCTACTCTCTGTTTACCCATGACTGTGTGCCTCTATATAACTCTAACATCTTCATCATGTATGCAGATGATACCACAGTGTTGGGTTGGATCAGTAACAACGATGAGGAGGGAGGAGATCCAAAACCTGGCAGCATGGTGTTCCACCAACAACCTCAGTCTTAATGCTGTGAAAACCAAAGAGCTGATTGTGGACTTTCAGACATTGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU308956 lncRNA downstream 40249 2013784 ~ 2016832 (-) True G272256
TU308720 lncRNA downstream 141805 1895095 ~ 1915276 (-) True G272038
TU308748 lncRNA downstream 244968 1808682 ~ 1812113 (-) True G272066
TU308735 lncRNA downstream 255654 1799964 ~ 1801427 (-) True G272053
TU308885 lncRNA downstream 352817 1703991 ~ 1704264 (-) True G272194
TU308975 lncRNA upstream 67747 2127560 ~ 2127840 (-) True G272271
TU308990 lncRNA upstream 104157 2163970 ~ 2164196 (-) True G272286
TU308994 lncRNA upstream 110867 2170680 ~ 2170898 (-) True G272290
TU308995 lncRNA upstream 111217 2171030 ~ 2171258 (-) True G272291
TU308997 lncRNA upstream 116900 2176713 ~ 2176934 (-) True G272293
CI01000066_01926730_01937406.mRNA mRNA downstream 119122 1926707 ~ 1937959 (-) True CI01000066_01926730_01937406
CI01000066_01921007_01923459.mRNA mRNA downstream 133622 1920719 ~ 1923459 (-) True CI01000066_01921007_01923459
CI01000066_01903226_01906591.mRNA mRNA downstream 149433 1903208 ~ 1907648 (-) True CI01000066_01903226_01906591
CI01000066_01889174_01893489.mRNA mRNA downstream 163534 1889174 ~ 1893547 (-) True CI01000066_01889174_01893489
CI01000066_01850128_01881359.mRNA mRNA downstream 175722 1849950 ~ 1881359 (-) True CI01000066_01850128_01881359
CI01000066_02074798_02093516.mRNA mRNA upstream 14985 2074798 ~ 2093516 (-) True CI01000066_02074798_02093516
CI01000066_02117493_02123683.mRNA mRNA upstream 56994 2116807 ~ 2123683 (-) True CI01000066_02117493_02123683
CI01000066_02197683_02248608.mRNA mRNA upstream 137870 2197683 ~ 2251163 (-) False CI01000066_02197683_02248608
CI01000066_02256946_02264417.mRNA mRNA upstream 196781 2256594 ~ 2265481 (-) True CI01000066_02256946_02264417
CI01000066_02325374_02330855.mRNA mRNA upstream 265185 2324998 ~ 2330855 (-) True CI01000066_02325374_02330855
TU308919 other downstream 71853 1959102 ~ 1985228 (-) True G272221
TU308908 other downstream 208222 1841679 ~ 1841743 (-) True G272212
TU308664 other downstream 232378 1824590 ~ 1824703 (-) True G271984

Expression Profile