RNA id: CI01000066_02808136_02808643.mRNA



Basic Information


Item Value
RNA id CI01000066_02808136_02808643.mRNA
length 1632
RNA type mRNA
GC content 0.36
exon number 2
gene id CI01000066_02808136_02808643
representative True

Chromosome Information


Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2806997 ~ 2808680 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTATAAAAATAAACTTTATTTTGTTTTTATGGTGAAATTGCACACGACTTTCAAATACAGTTAGTTGATTTTGACTTTACAACGCAAAACACATTTTTTAAGTCACGTGTGATTTATTTTCTTGCTTTCTGACTGATTTTCCTTTTACAGTAAAATATTATAGTTCATTAACATTAACTAAGAGTCACAATTCCCTGTGATATCAAACAACAATCACTCTTTGGATTTCATGCTTTACACTCTAAAAAAAAAAAAAATGTTGGGTTAAAAACAACCCAAGTTGGGTTGAAAATGGACAAACCCAGCGGTTGGGTTAAATGTTTGACCCAACGTGCTGGGTAGTTTTATTTAACCCAATTGTTTAAAAATGACTATATGGCTGGCTTAAACAGACATAATTACTAGAGGCAACAATAATAATCAAAAGGTGAACATTTATTAATAAGCAATTTAATTGTTTACTAAATGTTCATTTGTTAAACATATACAATACAATTTATTAAACATATACAATAAACATACTTTGGGTTCATTTTAAGAAAGCAATACAGTAATTTTTTAAACTATAGTTGAGTTAAATAAAACTTCTCAGCAGGTTGGGCAAACATTTAACCTAACCAGTGAGTCAAAATAACCCAGTCACTGAGTTTGTCCATTTTCAACCCAACTTGGGTTGTTTTTAACCCAGGATTTTTAGAGTGTTGGTTCTTTCTGACTTATTTTTATTTTACTGTAAAAATTGAATATTCATTATGATCACAATTCCTTGCGATATCAAACAAAATCAGTTTCCCTGCTTTCTTTGTGTATTTTTCCACAAAACTTCATTTATTAGCCCTAAATATGAAAATATTTAATATTTTTAGATGTTTATCAGATTCTTTCTTTGGTACTGGTTCTTCCTGACTGATTTTCTGTTTACAGCACAATTTTACAGTTCATTAACAGTTTTCTCGTAAACATTTCCCTGTCAATGGCCAATCGAGATCAAACAAAAATCATATGACGATCATTTGGGTTTCTTGGCAATTAGTTCTTGCTGACTGACTTTCCTCTAATATTTTATATAGCTAGTTAACATTCACTGGTACACAATATGATTCCCTATGGCTGCATGAGGGAGATCAAACAAAAATCACATGAACGTTGACAGTCCCAATCTGGTTACCATTCACACAGGCAGTCGGCAGTGTGGGCAGAATTCCCAGGATGGAGAAACCCGGTTTCTAGCACAGGAACTAAGGACCATCTCTCTGGCAGCCGAGGCATTTCAGCAGCCTGATGGATGTCCACATCCCATCGTGACGGTCTCAGCTTCCCGGCCTCCCCCTGCTGAGGAGCAGCTACAGGGAATGTGGGAGTGCTTGTTTGGAAAGCTGCAGAGGCAACAGTCTCTTCCGGTCTCAGTTCCTGGCAAAATAAAGATAAGGATAAAAATGGCAGGGAACGATCCTAAGCGGGAACATAGCAGAGCCGTTTCTGAGGATAAGGGAGCAAGACGTGCATCAGGGAGAGAACGAACGAAAACGCCCCTGTCAAAACAAACGCCTAAATCCTGTATTATGATGTTAGGTCATCATAGGTTAATGCAATAAGTGGGAAGCATGGTGAAGGAAAAGCTCATGGAAGGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU307853 lncRNA upstream 116449 2690233 ~ 2690548 (+) True G271267
TU307835 lncRNA upstream 126841 2665216 ~ 2680156 (+) False G271249
TU307834 lncRNA upstream 139210 2666469 ~ 2667787 (+) True G271249
TU307675 lncRNA upstream 156940 2593900 ~ 2650057 (+) True G271098
TU307929 lncRNA downstream 38395 2847075 ~ 2848167 (+) True G271336
TU307940 lncRNA downstream 56051 2864731 ~ 2865045 (+) True G271346
TU307916 lncRNA downstream 57474 2866154 ~ 2867172 (+) True CI01000066_02832702_02867162
TU307952 lncRNA downstream 119384 2928064 ~ 2929367 (+) True G271356
TU307964 lncRNA downstream 136671 2945351 ~ 2945828 (+) True G271365
CI01000066_02698232_02698587.mRNA mRNA upstream 108127 2698232 ~ 2698870 (+) True CI01000066_02698232_02698587
CI01000066_02644148_02648505.mRNA mRNA upstream 157892 2644086 ~ 2649105 (+) True CI01000066_02644148_02648505
CI01000066_02636488_02638384.mRNA mRNA upstream 168531 2636379 ~ 2638466 (+) False CI01000066_02636488_02638384
CI01000066_02623527_02632720.mRNA mRNA upstream 174242 2623527 ~ 2632755 (+) True CI01000066_02623527_02632720
CI01000066_02603700_02610129.mRNA mRNA upstream 196330 2602773 ~ 2610667 (+) True CI01000066_02603700_02610129
CI01000066_02832702_02867162.mRNA mRNA downstream 22945 2831625 ~ 2867388 (+) False CI01000066_02832702_02867162
CI01000066_02977587_02982602.mRNA mRNA downstream 166967 2975647 ~ 2982870 (+) False CI01000066_02977587_02982602
CI01000066_03011532_03035612.mRNA mRNA downstream 202735 3011415 ~ 3037266 (+) True CI01000066_03011532_03035612
CI01000066_03148145_03156040.mRNA mRNA downstream 339465 3148145 ~ 3156468 (+) True CI01000066_03148145_03156040
CI01000066_03174704_03185343.mRNA mRNA downstream 366024 3174704 ~ 3185343 (+) True CI01000066_03174704_03185343
TU307682 other upstream 367828 2430710 ~ 2439169 (+) True G271105
TU307667 other upstream 499977 2306852 ~ 2307020 (+) True G271092
TU307673 other upstream 527437 2269169 ~ 2279560 (+) True G271097
TU307529 other upstream 821983 1983956 ~ 1985014 (+) True CI01000066_01966833_01995697
TU307522 other upstream 959245 1844452 ~ 1847752 (+) True G270973
TU308039 other downstream 404324 3213004 ~ 3213245 (+) True G271433
TU308049 other downstream 538113 3346793 ~ 3353514 (+) True G271443

Expression Profile