RNA id: TU308998



Basic Information


Item Value
RNA id TU308998
length 232
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G272294
representative True

Chromosome Information


Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 2177128 ~ 2177359 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CACTCAGTTTGAGTGTTATATATCATATCTGAAAATAAATAGCTTGGGTTAGTCTGGGTTCAAAATTTTAGTATTATAGTAATATGGACAACAGAATAAAAGACATGTCTGTGTTCCCAGCATGAGACTTGATGCTTGTTCTAGTCTCTTATTTTGGGATTTGGAAAGGTCAGGCGGAATTTTAGGTATTGCGAGTGACCTTTTACTAAATTGCAGAGCAAAATGATAGGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU308997 lncRNA downstream 194 2176713 ~ 2176934 (-) True G272293
TU308995 lncRNA downstream 5870 2171030 ~ 2171258 (-) True G272291
TU308994 lncRNA downstream 6230 2170680 ~ 2170898 (-) True G272290
TU308990 lncRNA downstream 12932 2163970 ~ 2164196 (-) True G272286
TU308975 lncRNA downstream 49288 2127560 ~ 2127840 (-) True G272271
TU308749 lncRNA upstream 60823 2238182 ~ 2241265 (-) True G272067
TU309005 lncRNA upstream 72010 2249369 ~ 2249586 (-) False CI01000066_02197683_02248608
TU309006 lncRNA upstream 72328 2249687 ~ 2249958 (-) True CI01000066_02197683_02248608
TU309008 lncRNA upstream 74916 2252275 ~ 2252552 (-) True G272304
TU309014 lncRNA upstream 91459 2268818 ~ 2269061 (-) True G272310
CI01000066_02117493_02123683.mRNA mRNA downstream 53445 2116807 ~ 2123683 (-) True CI01000066_02117493_02123683
CI01000066_02074798_02093516.mRNA mRNA downstream 83612 2074798 ~ 2093516 (-) True CI01000066_02074798_02093516
CI01000066_02057126_02059813.mRNA mRNA downstream 117315 2057081 ~ 2059813 (-) True CI01000066_02057126_02059813
CI01000066_01926730_01937406.mRNA mRNA downstream 239169 1926707 ~ 1937959 (-) True CI01000066_01926730_01937406
CI01000066_01921007_01923459.mRNA mRNA downstream 253669 1920719 ~ 1923459 (-) True CI01000066_01921007_01923459
CI01000066_02197683_02248608.mRNA mRNA upstream 20324 2197683 ~ 2251163 (-) False CI01000066_02197683_02248608
CI01000066_02256946_02264417.mRNA mRNA upstream 79235 2256594 ~ 2265481 (-) True CI01000066_02256946_02264417
CI01000066_02325374_02330855.mRNA mRNA upstream 147639 2324998 ~ 2330855 (-) True CI01000066_02325374_02330855
CI01000066_02388814_02390434.mRNA mRNA upstream 211261 2388620 ~ 2390434 (-) True CI01000066_02388814_02390434
CI01000066_02395532_02401122.mRNA mRNA upstream 217937 2395296 ~ 2401122 (-) True CI01000066_02395532_02401122
TU308919 other downstream 191900 1959102 ~ 1985228 (-) True G272221
TU308908 other downstream 328269 1841679 ~ 1841743 (-) True G272212
TU308664 other downstream 352425 1824590 ~ 1824703 (-) True G271984

Expression Profile