RNA id: TU309163


Basic Information

Item Value
RNA id TU309163
length 222
lncRNA type inter_gene
GC content 0.35
exon number 2
gene id G272412
representative True

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 3077560 ~ 3077956 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGTCCCTCTCTCTCATAGCCTCTCTTTCATAGTAGATAGGTGCCATCATTTTGAGTTAAATGTGTTCAAAAGTCTGAAAATCTGTGTGTAATTTTAAGGAACGTCACTACCAAACATCTTTTTTCTGCAATTAAGCAAACTCTTTTTGGTGTTATTCCATAAATTTTTTTTTCTTTCTGTACACAACTGTTCAGAACTGTGCTAGCTAACCATGTGCTGATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU308765 lncRNA downstream 94679 2981752 ~ 2982881 (-) True G272083
TU308743 lncRNA downstream 96208 2979464 ~ 2981352 (-) True G272061
TU308710 lncRNA downstream 141522 2936019 ~ 2936038 (-) True G272028
TU308760 lncRNA downstream 142014 2934585 ~ 2935546 (-) True G272078
TU308757 lncRNA downstream 219262 2775961 ~ 2858298 (-) True G272075
TU309168 lncRNA upstream 7259 3085215 ~ 3085603 (-) True G272417
TU309180 lncRNA upstream 35799 3113755 ~ 3113997 (-) True G272428
TU309183 lncRNA upstream 42508 3120464 ~ 3120906 (-) True G272431
TU309219 lncRNA upstream 136840 3214796 ~ 3216074 (-) True G272462
TU309232 lncRNA upstream 165312 3243268 ~ 3314289 (-) True G272472
CI01000066_03044933_03045997.mRNA mRNA downstream 31563 3044336 ~ 3045997 (-) True CI01000066_03044933_03045997
CI01000066_02891474_02931062.mRNA mRNA downstream 146498 2890829 ~ 2931062 (-) False CI01000066_02891474_02931062
CI01000066_02874325_02887004.mRNA mRNA downstream 190227 2874061 ~ 2887333 (-) True CI01000066_02874325_02887004
CI01000066_02709190_02806338.mRNA mRNA downstream 271222 2709190 ~ 2806338 (-) True CI01000066_02709190_02806338
CI01000066_02652332_02680009.mRNA mRNA downstream 397520 2651327 ~ 2680040 (-) True CI01000066_02652332_02680009
CI01000066_03158972_03165320.mRNA mRNA upstream 80360 3158316 ~ 3165320 (-) True CI01000066_03158972_03165320
CI01000066_03203296_03203476.mRNA mRNA upstream 125167 3203123 ~ 3203476 (-) True CI01000066_03203296_03203476
CI01000066_03439936_03446824.mRNA mRNA upstream 361723 3439679 ~ 3448858 (-) False CI01000066_03439936_03446824
CI01000066_03454386_03455995.mRNA mRNA upstream 376374 3454330 ~ 3456166 (-) True CI01000066_03454386_03455995
CI01000066_03649007_03654018.mRNA mRNA upstream 570976 3648932 ~ 3654018 (-) True CI01000066_03649007_03654018
TU308919 other downstream 1092332 1959102 ~ 1985228 (-) True G272221
TU308908 other downstream 1228701 1841679 ~ 1841743 (-) True G272212
TU308664 other downstream 1252857 1824590 ~ 1824703 (-) True G271984

Expression Profile