RNA id: TU309180


Basic Information

Item Value
RNA id TU309180
length 243
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G272428
representative True

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 3113755 ~ 3113997 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCTTCGGTTGCTCAACAACAACAAAGCTGGAGAATCTCACGCAGCCAAAATGAGGATTGTCAGTAACGGTGTTCAGCCTTACATTGTTCAAACTGGAGTCGACACTGATGGAGAGACTCAGGAAGAAGTTACAACTTTTAGAATGAAACTGGACGTTTCTGAATGGTTAGTGGATAAATTTATGTAGTTGCTGTGGAGTTGATTCAACTCATCGACTAGCATGTGCCGTCATGTTAATCTTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU309168 lncRNA downstream 28152 3085215 ~ 3085603 (-) True G272417
TU309163 lncRNA downstream 35799 3077560 ~ 3077956 (-) True G272412
TU308765 lncRNA downstream 130874 2981752 ~ 2982881 (-) True G272083
TU308743 lncRNA downstream 132403 2979464 ~ 2981352 (-) True G272061
TU308710 lncRNA downstream 177717 2936019 ~ 2936038 (-) True G272028
TU309183 lncRNA upstream 6467 3120464 ~ 3120906 (-) True G272431
TU309219 lncRNA upstream 100799 3214796 ~ 3216074 (-) True G272462
TU309232 lncRNA upstream 129271 3243268 ~ 3314289 (-) True G272472
TU309312 lncRNA upstream 329534 3488052 ~ 3488061 (-) True G272549
TU309327 lncRNA upstream 353896 3467893 ~ 3567133 (-) True G272559
CI01000066_03044933_03045997.mRNA mRNA downstream 67758 3044336 ~ 3045997 (-) True CI01000066_03044933_03045997
CI01000066_02891474_02931062.mRNA mRNA downstream 182693 2890829 ~ 2931062 (-) False CI01000066_02891474_02931062
CI01000066_02874325_02887004.mRNA mRNA downstream 226422 2874061 ~ 2887333 (-) True CI01000066_02874325_02887004
CI01000066_02709190_02806338.mRNA mRNA downstream 307417 2709190 ~ 2806338 (-) True CI01000066_02709190_02806338
CI01000066_02652332_02680009.mRNA mRNA downstream 433715 2651327 ~ 2680040 (-) True CI01000066_02652332_02680009
CI01000066_03158972_03165320.mRNA mRNA upstream 44319 3158316 ~ 3165320 (-) True CI01000066_03158972_03165320
CI01000066_03203296_03203476.mRNA mRNA upstream 89126 3203123 ~ 3203476 (-) True CI01000066_03203296_03203476
CI01000066_03439936_03446824.mRNA mRNA upstream 325682 3439679 ~ 3448858 (-) False CI01000066_03439936_03446824
CI01000066_03454386_03455995.mRNA mRNA upstream 340333 3454330 ~ 3456166 (-) True CI01000066_03454386_03455995
CI01000066_03649007_03654018.mRNA mRNA upstream 534935 3648932 ~ 3654018 (-) True CI01000066_03649007_03654018
TU308919 other downstream 1128527 1959102 ~ 1985228 (-) True G272221
TU308908 other downstream 1264896 1841679 ~ 1841743 (-) True G272212
TU308664 other downstream 1289052 1824590 ~ 1824703 (-) True G271984

Expression Profile