RNA id: TU309384


Basic Information

Item Value
RNA id TU309384
length 246
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G272613
representative True

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 3587556 ~ 3587801 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGGCAATGGGCCATCGTAACAATAAAAAAGTAACACTAATCAGGAAGAATCAATGAGAGGAGAACACCCATGAATTCATCCTTCAAGATGAGGAGGGAGGGAATGACGTAAACTAGACCTGCCATCAACCAACATCCTCATTAACCTAGATGAGCCATGGAGGAGAAAAACAGCTTGTGAAGGACGACTACTGCATTTTTTATTCCACCTATTCCAGTGGAAACCGTGAAGGCTCTTAAACTCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU309329 lncRNA downstream 5437 3581780 ~ 3582119 (-) True G272561
TU309327 lncRNA downstream 20423 3467893 ~ 3567133 (-) True G272559
TU309312 lncRNA downstream 99495 3488052 ~ 3488061 (-) True G272549
TU309232 lncRNA downstream 273267 3243268 ~ 3314289 (-) True G272472
TU309219 lncRNA downstream 371482 3214796 ~ 3216074 (-) True G272462
TU309385 lncRNA upstream 527 3588328 ~ 3588529 (-) True G272614
TU309386 lncRNA upstream 1194 3588995 ~ 3589368 (-) True G272615
TU309389 lncRNA upstream 4348 3592149 ~ 3592438 (-) True G272618
TU309396 lncRNA upstream 10997 3598798 ~ 3599122 (-) True G272624
TU309398 lncRNA upstream 15178 3602979 ~ 3603234 (-) True G272626
CI01000066_03454386_03455995.mRNA mRNA downstream 131390 3454330 ~ 3456166 (-) True CI01000066_03454386_03455995
CI01000066_03439936_03446824.mRNA mRNA downstream 138698 3439679 ~ 3448858 (-) False CI01000066_03439936_03446824
CI01000066_03203296_03203476.mRNA mRNA downstream 384080 3203123 ~ 3203476 (-) True CI01000066_03203296_03203476
CI01000066_03158972_03165320.mRNA mRNA downstream 422236 3158316 ~ 3165320 (-) True CI01000066_03158972_03165320
CI01000066_03044933_03045997.mRNA mRNA downstream 541559 3044336 ~ 3045997 (-) True CI01000066_03044933_03045997
CI01000066_03649007_03654018.mRNA mRNA upstream 61131 3648932 ~ 3654018 (-) True CI01000066_03649007_03654018
CI01000066_03655461_03659325.mRNA mRNA upstream 67031 3654832 ~ 3659717 (-) True CI01000066_03655461_03659325
CI01000066_03711890_03717941.mRNA mRNA upstream 123648 3711449 ~ 3717941 (-) True CI01000066_03711890_03717941
TU308919 other downstream 1602328 1959102 ~ 1985228 (-) True G272221
TU308908 other downstream 1738697 1841679 ~ 1841743 (-) True G272212
TU308664 other downstream 1762853 1824590 ~ 1824703 (-) True G271984

Expression Profile