RNA id: TU309429


Basic Information

Item Value
RNA id TU309429
length 421
lncRNA type intronic
GC content 0.53
exon number 2
gene id G272647
representative True

Chromosome Information

Item Value
chromosome id CI01000066
NCBI id null
chromosome length 3719324
location 3703490 ~ 3704368 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACAGACACTCGCGTCTCTACACACCTTCCAGTCTTTGGGGTCCAGAGTCTTCAGCATCGGATACTCCTCCAGCTGCAGCTCCTCATCCTCCTCTTCCTCAGACAGCTCCTCCTCCTCCTCCAGCTCTTGAAATGAAGCCGACACATTTCTAATCCTGCGCTTCAGGAACGCCTCGAACCAGCGACCCACAGGCTCAACCTGGACCTGCACTGAGCGGCGACGGCGTTATAAACCACTGTGAGCTGCCCCTCTAACGCCTCCTTCAGCATTTTTCACTAGTTCAGACACACAGATGACTTAAAGAGTTTGCATTAGCATTAAAGATAGGCTTGATTCCTGTATTCTTTCGCCGCTGTTTTGCCCCGGTCTGCCAGATCCACATGGGCCCACACAGCTGTCTGCTGGGAAACCGTGTTACACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU309422 lncRNA downstream 1885 3692779 ~ 3701605 (-) True G272640
TU309409 lncRNA downstream 24656 3675663 ~ 3678834 (-) True G272637
TU309374 lncRNA downstream 37252 3662554 ~ 3666238 (-) True G272604
TU309402 lncRNA downstream 83896 3619368 ~ 3619594 (-) True G272630
TU309394 lncRNA downstream 85870 3615983 ~ 3617620 (-) True G272622
TU309428 lncRNA upstream 1328 3705696 ~ 3706773 (-) True G272646
CI01000066_03655461_03659325.mRNA mRNA downstream 43773 3654832 ~ 3659717 (-) True CI01000066_03655461_03659325
CI01000066_03649007_03654018.mRNA mRNA downstream 49472 3648932 ~ 3654018 (-) True CI01000066_03649007_03654018
CI01000066_03454386_03455995.mRNA mRNA downstream 247324 3454330 ~ 3456166 (-) True CI01000066_03454386_03455995
CI01000066_03439936_03446824.mRNA mRNA downstream 254632 3439679 ~ 3448858 (-) False CI01000066_03439936_03446824
CI01000066_03203296_03203476.mRNA mRNA downstream 500014 3203123 ~ 3203476 (-) True CI01000066_03203296_03203476
CI01000066_03711890_03717941.mRNA mRNA upstream 7081 3711449 ~ 3717941 (-) True CI01000066_03711890_03717941
TU308919 other downstream 1718262 1959102 ~ 1985228 (-) True G272221
TU308908 other downstream 1854631 1841679 ~ 1841743 (-) True G272212
TU308664 other downstream 1878787 1824590 ~ 1824703 (-) True G271984

Expression Profile