RNA id: TU310023


Basic Information

Item Value
RNA id TU310023
length 202
lncRNA type intronic
GC content 0.45
exon number 1
gene id G273192
representative True

Chromosome Information

Item Value
chromosome id CI01000068
NCBI id null
chromosome length 1053214
location 787461 ~ 787662 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGAGCCGCGGCTGAATGCGTAATTAAAACAAATGATTCCAGCTCCCGGTTTGATTCAATTTGCGTGATTACAGGCAAAATGCTCGGAGAACGTAATAAAATTCTTTCTATTAATTAGAAAAGACTAATGACTAAAACGCCGCGGTGTGGCTCATGAGGCGTTTGGCGCGAGTGAGTGATATCTGTAGCGCCGCTGATACGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU310000 lncRNA downstream 93061 693777 ~ 694400 (-) True G273171
TU309852 lncRNA downstream 107256 672680 ~ 674801 (-) True G273035
TU309860 lncRNA downstream 142340 644005 ~ 645121 (-) True CI01000068_00644494_00651464
TU309988 lncRNA downstream 187758 599601 ~ 599703 (-) True G273165
TU309859 lncRNA upstream 162900 950562 ~ 952947 (-) True G273042
TU309849 lncRNA upstream 209190 996852 ~ 999620 (-) True G273032
CI01000068_00748555_00755073.mRNA mRNA downstream 32388 748164 ~ 755073 (-) True CI01000068_00748555_00755073
CI01000068_00728788_00730622.mRNA mRNA downstream 56839 728558 ~ 730622 (-) True CI01000068_00728788_00730622
CI01000068_00713308_00716436.mRNA mRNA downstream 71025 713308 ~ 716436 (-) True CI01000068_00713308_00716436
CI01000068_00704059_00713223.mRNA mRNA downstream 74238 704059 ~ 713223 (-) True CI01000068_00704059_00713223
CI01000068_00679462_00683567.mRNA mRNA downstream 103894 679021 ~ 683567 (-) False CI01000068_00679462_00683567
CI01000068_00827970_00830234.mRNA mRNA upstream 39958 827620 ~ 830234 (-) True CI01000068_00827970_00830234
CI01000068_00835450_00835656.mRNA mRNA upstream 47657 835319 ~ 835656 (-) True CI01000068_00835450_00835656
CI01000068_00847176_00865067.mRNA mRNA upstream 59012 846674 ~ 866781 (-) True CI01000068_00847176_00865067
CI01000068_00902023_00912480.mRNA mRNA upstream 113882 901544 ~ 913493 (-) True CI01000068_00902023_00912480
CI01000068_00919068_00936117.mRNA mRNA upstream 131079 918741 ~ 936595 (-) True CI01000068_00919068_00936117
TU309831 other downstream 122565 662204 ~ 664896 (-) True CI01000068_00663458_00672380
TU309991 other downstream 187063 597208 ~ 600398 (-) False CI01000068_00582352_00600267

Expression Profile