RNA id: CI01000069_03721128_03722393.mRNA


Basic Information

Item Value
RNA id CI01000069_03721128_03722393.mRNA
length 577
RNA type mRNA
GC content 0.46
exon number 4
gene id CI01000069_03721128_03722393
representative True

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3720944 ~ 3722393 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GATGACCATTTATTGGAAGAACACTTGTTTGAAATTAAAGTATTCTCATCTGAAACAAAGCACCTTCAATACGATTCAGCCTCGACTGCTGTGCGAGAAGATGAGGACAATGCAGGTGGATTCATCATTGGTCAGGAGGAGTACAGGAGAACAACTGAGGACTTTGTGGTCTGGAGCGACCACAACCATCTCCGGCTTAACATCTCAAAAATTGTGGATTTCAGGAGGAAGAGGACACAATCAATTCTGATCACCATCCAGGGTATAGAGATGGTCTCCAGCCACAGATACCTTGCGACAGTGGTGGCCAGTGCTCTGTTCTTTGATGTGGCGTGCTGGGGAGAGGGTGTCCGTATGGGAGATAGAAACAGAGTCCAGCAGGTGGTGGAGTGAAGAATACTCTCTAAGCTGAGATCGATAATGAACAATCTCTCACATCCACTCCACGTCCTGGGGGAGATTAACAACAGCAACTTCAGTCACAGACTGCTTTCACTAAAGTGCAAGTCTGAGTGCAGCAGGAGGTCCTTCCTGTCGGCGGGGATCAGATTGTTTTATTTGCTATGATATTAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU312850 lncRNA downstream 84681 3612753 ~ 3636263 (-) True G275754
TU312924 lncRNA downstream 87830 3614318 ~ 3633114 (-) True G275828
TU312846 lncRNA downstream 93190 3595721 ~ 3627754 (-) True G275750
TU312922 lncRNA downstream 106105 3607452 ~ 3614839 (-) True G275826
TU312974 lncRNA downstream 360243 3360488 ~ 3360701 (-) True G275878
TU313017 lncRNA upstream 14261 3736654 ~ 3736958 (-) True G275920
TU313018 lncRNA upstream 15079 3737472 ~ 3737689 (-) True G275921
TU312852 lncRNA upstream 69196 3791589 ~ 3796952 (-) True G275756
TU312886 lncRNA upstream 100999 3823392 ~ 3826580 (-) True G275790
TU312869 lncRNA upstream 116841 3839234 ~ 3843586 (-) True G275773
CI01000069_03678617_03697993.mRNA mRNA downstream 22188 3678298 ~ 3698756 (-) True CI01000069_03678617_03697993
CI01000069_03670799_03677837.mRNA mRNA downstream 43101 3670271 ~ 3677843 (-) True CI01000069_03670799_03677837
CI01000069_03667639_03669979.mRNA mRNA downstream 50965 3667620 ~ 3669979 (-) True CI01000069_03667639_03669979
CI01000069_03578433_03584741.mRNA mRNA downstream 135713 3578433 ~ 3585231 (-) True CI01000069_03578433_03584741
CI01000069_03571631_03573352.mRNA mRNA downstream 145201 3571535 ~ 3575743 (-) False CI01000069_03571631_03573352
CI01000069_03739653_03764284.mRNA mRNA upstream 16057 3738450 ~ 3764284 (-) True CI01000069_03739653_03764284
CI01000069_03768812_03787588.mRNA mRNA upstream 46199 3768592 ~ 3787588 (-) False CI01000069_03768812_03787588
CI01000069_03804630_03807180.mRNA mRNA upstream 82237 3804630 ~ 3807180 (-) False CI01000069_03804630_03807180
CI01000069_03871972_03884153.mRNA mRNA upstream 149532 3871925 ~ 3884153 (-) True CI01000069_03871972_03884153
CI01000069_03939251_03942780.mRNA mRNA upstream 216811 3939204 ~ 3943095 (-) True CI01000069_03939251_03942780
TU312899 other downstream 144609 3563293 ~ 3576335 (-) True CI01000069_03571631_03573352
TU312851 other downstream 294570 3426149 ~ 3426374 (-) True G275755
TU312791 other downstream 642776 2992504 ~ 3078168 (-) True G275699
TU312760 other downstream 720511 2989026 ~ 2991817 (-) True G275668
TU312711 other downstream 1090628 2621752 ~ 2630316 (-) True G275624
TU312875 other upstream 43280 3765673 ~ 3769220 (-) True CI01000069_03768812_03787588
TU312842 other upstream 82223 3805663 ~ 3805758 (-) True G275746
TU313201 other upstream 1217128 4942073 ~ 4942199 (-) True G276079
TU313215 other upstream 1246902 4985966 ~ 4986424 (-) True CI01000069_04985959_04986408

Expression Profile