RNA id: CI01000069_04574882_04576116.mRNA


Basic Information

Item Value
RNA id CI01000069_04574882_04576116.mRNA
length 837
RNA type mRNA
GC content 0.40
exon number 2
gene id CI01000069_04574882_04576116
representative True

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4574366 ~ 4576128 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGAAATGTGAAAATGGTCCATTCTAGGCCCAGCTCCACAGGGGGACCAGGGATCTTCTTACCTATCATAACCTTTGTTTTTTTGGCAATCTGCTGTACTGGCTTCTGTAAAATGCTCCAGCGGGTCCGTAAGGAGCGCATAGAGCACCTGCAGGCTCAAGCCATGGATCAATCGTCTGTCTACGTCATTCCGATCTCTCTGTCCGATGATGACCTGCACAGACCGCCACGCTACAGCACCGTACAGTTCTACGAGCCCCCTCCTGCTTATAACGAGGTAACCGTGGAGATATTGTCAATTATCTACACCATCATTGAATGAATCTTGTCCTGAAATGTTTAAGTTCACTGTTAATGCTTTTTAAGTTAATGAGGATACAACATTTATCTTGCAGTTACATATAAAGGCAGAAAGCCCTCTGGAACCCCCTCCTGAATATTCAGAGTCTGTCTCTGCCTCACCTTCACATTCATGAATCATGATCACACCAAACGTCAGAGTATCTCAAGCACTTGGACTGGTTAAAGGAAAAAAAGAGGCAAAGTGGGATTCTCGTGACTTTTTCTAAGGACTATGATTCATTCTACCTATGCAAAGGATAGTGAGGAATTTAAATAGGGGGAAGAAAATGTAACAGACGTGATGATCTGTGATTCTGTTGGGATTTTGAACATGTCTTACAGGGTCATGAACTATTTCACACTATGAGCAGAAGGAACTTGGTTAAAAAATTTAAAAATGTATATATGTTTTTAGTGAATATTTATAAATTTTGCACACGCTAGCTAAACCCTTTTTGTTAACTTTGTGAAATGAAATGTGTTAATTTATAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU313159 lncRNA downstream 16702 4555209 ~ 4557664 (-) True G276052
TU313149 lncRNA downstream 46486 4527082 ~ 4527880 (-) True G276042
TU312866 lncRNA downstream 358676 4143168 ~ 4215690 (-) True G275770
TU312904 lncRNA downstream 364717 4207592 ~ 4209649 (-) True G275808
TU312853 lncRNA downstream 411951 4162063 ~ 4162415 (-) True G275757
TU313177 lncRNA upstream 37726 4613854 ~ 4617428 (-) False G276064
TU313179 lncRNA upstream 37726 4613854 ~ 4621254 (-) False G276064
TU313181 lncRNA upstream 40801 4616929 ~ 4623737 (-) False G276064
TU313180 lncRNA upstream 46974 4623102 ~ 4624902 (-) True G276064
TU313251 lncRNA upstream 89042 4665170 ~ 4665413 (-) True G276129
CI01000069_04444787_04454292.mRNA mRNA downstream 120074 4444226 ~ 4454292 (-) True CI01000069_04444787_04454292
CI01000069_04387255_04404199.mRNA mRNA downstream 170023 4386997 ~ 4404343 (-) True CI01000069_04387255_04404199
CI01000069_04380270_04382951.mRNA mRNA downstream 191415 4380172 ~ 4382951 (-) True CI01000069_04380270_04382951
CI01000069_04370591_04375147.mRNA mRNA downstream 199219 4369896 ~ 4375147 (-) True CI01000069_04370591_04375147
CI01000069_04350619_04363291.mRNA mRNA downstream 210684 4350452 ~ 4363682 (-) True CI01000069_04350619_04363291
CI01000069_04579172_04593867.mRNA mRNA upstream 2481 4578609 ~ 4594023 (-) True CI01000069_04579172_04593867
CI01000069_04595809_04598174.mRNA mRNA upstream 19622 4595750 ~ 4598174 (-) True CI01000069_04595809_04598174
CI01000069_04599199_04600481.mRNA mRNA upstream 23041 4599169 ~ 4600481 (-) True CI01000069_04599199_04600481
CI01000069_04603992_04607459.mRNA mRNA upstream 26971 4603099 ~ 4607586 (-) True CI01000069_04603992_04607459
CI01000069_04628032_04638137.mRNA mRNA upstream 51725 4627853 ~ 4638137 (-) True CI01000069_04628032_04638137
TU312842 other downstream 767289 3805663 ~ 3805758 (-) True G275746
TU312875 other downstream 805146 3765673 ~ 3769220 (-) True CI01000069_03768812_03787588
TU312899 other downstream 998031 3563293 ~ 3576335 (-) True CI01000069_03571631_03573352
TU312851 other downstream 1147992 3426149 ~ 3426374 (-) True G275755
TU312791 other downstream 1496198 2992504 ~ 3078168 (-) True G275699
TU313201 other upstream 363393 4942073 ~ 4942199 (-) True G276079
TU313215 other upstream 393167 4985966 ~ 4986424 (-) True CI01000069_04985959_04986408

Expression Profile