RNA id: TU310087


Basic Information

Item Value
RNA id TU310087
length 206
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G273254
representative True

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 53293 ~ 53498 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGCAGAGACAGATGGTAAGTGAGGCAGAGAGAGAATCCTTTCCTAATGTGTAACAGCATTTATTTACCTCAGTCTCATATTAAAAAAATGCAGTGAATCAATGTATTGAGTCAGTTTTACATTTGAATCAGTGGTACTTGACAAGTATGCAAGCACACCCTCAACCTTAATAGCTTGATCTGTCTTCGCCTCGCAGCAGAATTCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU310086 lncRNA upstream 78 52872 ~ 53215 (+) True G273253
TU310084 lncRNA upstream 9938 43087 ~ 43355 (+) True G273251
TU310085 lncRNA upstream 11108 41589 ~ 42185 (+) True G273252
TU310063 lncRNA upstream 13635 38589 ~ 39658 (+) True G273231
TU310088 lncRNA downstream 243 53741 ~ 53948 (+) True G273255
TU310089 lncRNA downstream 845 54343 ~ 54546 (+) True G273256
TU310090 lncRNA downstream 1081 54579 ~ 54957 (+) True G273257
TU310098 lncRNA downstream 75596 129094 ~ 129314 (+) True G273265
TU310111 lncRNA downstream 117404 170902 ~ 171320 (+) True G273278
CI01000069_00016660_00026781.mRNA mRNA upstream 26459 16315 ~ 26834 (+) True CI01000069_00016660_00026781
CI01000069_00066477_00068981.mRNA mRNA downstream 12562 66060 ~ 69349 (+) True CI01000069_00066477_00068981
CI01000069_00075784_00090901.mRNA mRNA downstream 21896 75394 ~ 91096 (+) True CI01000069_00075784_00090901
CI01000069_00091982_00141515.mRNA mRNA downstream 38176 91674 ~ 142316 (+) True CI01000069_00091982_00141515
CI01000069_00147622_00154047.mRNA mRNA downstream 94009 147507 ~ 154068 (+) True CI01000069_00147622_00154047
CI01000069_00246608_00247385.mRNA mRNA downstream 193013 246511 ~ 248179 (+) True CI01000069_00246608_00247385
TU310194 other downstream 424229 477727 ~ 479081 (+) True G273359
TU311015 other downstream 1979902 2112843 ~ 2172193 (+) True G274124
TU311181 other downstream 2619126 2672624 ~ 2681158 (+) True G274270
TU311230 other downstream 2839348 2892846 ~ 2892971 (+) True G274314
TU311499 other downstream 3559219 3636100 ~ 3638430 (+) True CI01000069_03636156_03639756

Expression Profile