RNA id: TU310088



Basic Information


Item Value
RNA id TU310088
length 208
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G273255
representative True

Chromosome Information


Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 53741 ~ 53948 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GAAAATTAAGTAGCTTTTGAATGCTATAATGCCACTCCCTTTACAGGAAACCAGATAACTATCTTGCATCATGGGAATATGGCTAAAGGCAAAAGTAACTGTGGCTGTAAGGTTGCAATTTATTCACAATACACAGGTAATGTTTGGAACAAGGTCATAAATACATTATTAATAAACAGAGAAAAGATAATGATGATCTATATTTGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU310087 lncRNA upstream 243 53293 ~ 53498 (+) True G273254
TU310086 lncRNA upstream 526 52872 ~ 53215 (+) True G273253
TU310084 lncRNA upstream 10386 43087 ~ 43355 (+) True G273251
TU310085 lncRNA upstream 11556 41589 ~ 42185 (+) True G273252
TU310063 lncRNA upstream 14083 38589 ~ 39658 (+) True G273231
TU310089 lncRNA downstream 395 54343 ~ 54546 (+) True G273256
TU310090 lncRNA downstream 631 54579 ~ 54957 (+) True G273257
TU310098 lncRNA downstream 75146 129094 ~ 129314 (+) True G273265
TU310111 lncRNA downstream 116954 170902 ~ 171320 (+) True G273278
TU310114 lncRNA downstream 119364 173312 ~ 173529 (+) True G273281
CI01000069_00016660_00026781.mRNA mRNA upstream 26907 16315 ~ 26834 (+) True CI01000069_00016660_00026781
CI01000069_00066477_00068981.mRNA mRNA downstream 12112 66060 ~ 69349 (+) True CI01000069_00066477_00068981
CI01000069_00075784_00090901.mRNA mRNA downstream 21446 75394 ~ 91096 (+) True CI01000069_00075784_00090901
CI01000069_00091982_00141515.mRNA mRNA downstream 37726 91674 ~ 142316 (+) True CI01000069_00091982_00141515
CI01000069_00147622_00154047.mRNA mRNA downstream 93559 147507 ~ 154068 (+) True CI01000069_00147622_00154047
CI01000069_00246608_00247385.mRNA mRNA downstream 192563 246511 ~ 248179 (+) True CI01000069_00246608_00247385
TU310194 other downstream 423779 477727 ~ 479081 (+) True G273359
TU311015 other downstream 1979452 2112843 ~ 2172193 (+) True G274124
TU311181 other downstream 2618676 2672624 ~ 2681158 (+) True G274270
TU311230 other downstream 2838898 2892846 ~ 2892971 (+) True G274314
TU311499 other downstream 3558769 3636100 ~ 3638430 (+) True CI01000069_03636156_03639756

Expression Profile