RNA id: TU310098



Basic Information


Item Value
RNA id TU310098
length 221
lncRNA type intronic
GC content 0.38
exon number 1
gene id G273265
representative True

Chromosome Information


Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 129094 ~ 129314 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATACTGAGTACAGTACAACAAACAGTAATAATGGATACCATTTCCTGGGGATATGCATGTTAATTTATAGAACAGTCTGTCTATAAATTAATGCAGGAAAGTCTGTTTTCTGTGGGAAAGATGCAGGTTTTCTGTGTGTCTCTTTGTCTCTGCTCTTCTCTGCTCTTCCATGTGGCAACCAACATTCTTTAGCGCAATAAAACTTGTAACTGAGAACTTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU310090 lncRNA upstream 74137 54579 ~ 54957 (+) True G273257
TU310089 lncRNA upstream 74548 54343 ~ 54546 (+) True G273256
TU310088 lncRNA upstream 75146 53741 ~ 53948 (+) True G273255
TU310087 lncRNA upstream 75596 53293 ~ 53498 (+) True G273254
TU310086 lncRNA upstream 75879 52872 ~ 53215 (+) True G273253
TU310111 lncRNA downstream 41588 170902 ~ 171320 (+) True G273278
TU310114 lncRNA downstream 43998 173312 ~ 173529 (+) True G273281
TU310115 lncRNA downstream 44397 173711 ~ 174053 (+) True G273282
TU310117 lncRNA downstream 46684 175998 ~ 266154 (+) True G273284
TU310166 lncRNA downstream 162871 292185 ~ 292397 (+) True G273333
CI01000069_00075784_00090901.mRNA mRNA upstream 37998 75394 ~ 91096 (+) True CI01000069_00075784_00090901
CI01000069_00066477_00068981.mRNA mRNA upstream 59745 66060 ~ 69349 (+) True CI01000069_00066477_00068981
CI01000069_00016660_00026781.mRNA mRNA upstream 102260 16315 ~ 26834 (+) True CI01000069_00016660_00026781
CI01000069_00147622_00154047.mRNA mRNA downstream 18193 147507 ~ 154068 (+) True CI01000069_00147622_00154047
CI01000069_00246608_00247385.mRNA mRNA downstream 117197 246511 ~ 248179 (+) True CI01000069_00246608_00247385
CI01000069_00357901_00365747.mRNA mRNA downstream 228587 357901 ~ 366519 (+) True CI01000069_00357901_00365747
CI01000069_00403871_00404476.mRNA mRNA downstream 274292 403606 ~ 404493 (+) True CI01000069_00403871_00404476
CI01000069_00575065_00578555.mRNA mRNA downstream 445751 575065 ~ 578643 (+) True CI01000069_00575065_00578555
TU310194 other downstream 348413 477727 ~ 479081 (+) True G273359
TU311015 other downstream 1904086 2112843 ~ 2172193 (+) True G274124
TU311181 other downstream 2543310 2672624 ~ 2681158 (+) True G274270
TU311230 other downstream 2763532 2892846 ~ 2892971 (+) True G274314
TU311499 other downstream 3483403 3636100 ~ 3638430 (+) True CI01000069_03636156_03639756

Expression Profile