RNA id: TU310114



Basic Information


Item Value
RNA id TU310114
length 218
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G273281
representative True

Chromosome Information


Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 173312 ~ 173529 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTAGTTCACCCAAAAATGAAAATAACGTAATTTATTACTGACCCTCATGTCGTTCTACACCCGTAAGTCCTTCGTTCATCTTCGGAACACAAATTAAGATATTGTTGATGAAATCCAATGGCTCAGTGAAGCCTCTATAGAGAGCAAAGCCATTGAAACTCTCAAGATACATAAAAGTACTAAAAACATATTTGAAACAGTACACTGCAGTCACCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU310111 lncRNA upstream 1992 170902 ~ 171320 (+) True G273278
TU310098 lncRNA upstream 43998 129094 ~ 129314 (+) True G273265
TU310090 lncRNA upstream 118355 54579 ~ 54957 (+) True G273257
TU310089 lncRNA upstream 118766 54343 ~ 54546 (+) True G273256
TU310088 lncRNA upstream 119364 53741 ~ 53948 (+) True G273255
TU310115 lncRNA downstream 182 173711 ~ 174053 (+) True G273282
TU310117 lncRNA downstream 2469 175998 ~ 266154 (+) True G273284
TU310166 lncRNA downstream 118656 292185 ~ 292397 (+) True G273333
TU310171 lncRNA downstream 158509 332038 ~ 332312 (+) True G273338
TU310235 lncRNA downstream 285268 458797 ~ 460096 (+) True G273400
CI01000069_00147622_00154047.mRNA mRNA upstream 19244 147507 ~ 154068 (+) True CI01000069_00147622_00154047
CI01000069_00091982_00141515.mRNA mRNA upstream 30996 91674 ~ 142316 (+) True CI01000069_00091982_00141515
CI01000069_00075784_00090901.mRNA mRNA upstream 82216 75394 ~ 91096 (+) True CI01000069_00075784_00090901
CI01000069_00066477_00068981.mRNA mRNA upstream 103963 66060 ~ 69349 (+) True CI01000069_00066477_00068981
CI01000069_00016660_00026781.mRNA mRNA upstream 146478 16315 ~ 26834 (+) True CI01000069_00016660_00026781
CI01000069_00246608_00247385.mRNA mRNA downstream 72982 246511 ~ 248179 (+) True CI01000069_00246608_00247385
CI01000069_00357901_00365747.mRNA mRNA downstream 184372 357901 ~ 366519 (+) True CI01000069_00357901_00365747
CI01000069_00403871_00404476.mRNA mRNA downstream 230077 403606 ~ 404493 (+) True CI01000069_00403871_00404476
CI01000069_00575065_00578555.mRNA mRNA downstream 401536 575065 ~ 578643 (+) True CI01000069_00575065_00578555
CI01000069_00596413_00741443.mRNA mRNA downstream 422884 596413 ~ 741443 (+) True CI01000069_00596413_00741443
TU310194 other downstream 304198 477727 ~ 479081 (+) True G273359
TU311015 other downstream 1859871 2112843 ~ 2172193 (+) True G274124
TU311181 other downstream 2499095 2672624 ~ 2681158 (+) True G274270
TU311230 other downstream 2719317 2892846 ~ 2892971 (+) True G274314
TU311499 other downstream 3439188 3636100 ~ 3638430 (+) True CI01000069_03636156_03639756

Expression Profile