RNA id: TU311156


Basic Information

Item Value
RNA id TU311156
length 227
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G274250
representative True

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2538443 ~ 2538669 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGAAGAGATAGCAGCCAACTTTACCACTTTACGATGAAATACATGTAACATATGAGCCCGGAGACCATGTAGGCTAGTGTGTTTAAAAATCCATGAGATTAATTAAATATTATTAGCCTGAACTGACACAACAGAGATACTAAAATAACGATTAAATCGCAAAAACCGACCAGTCAAGTTTCTCGCTGTCAATCAAACCTAAATCTTCAGACAGACCAAAAACACGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU311132 lncRNA upstream 39857 2492146 ~ 2498586 (+) True G274227
TU311131 lncRNA upstream 48813 2489132 ~ 2489630 (+) True G274226
TU311130 lncRNA upstream 51136 2486969 ~ 2487307 (+) True G274225
TU311119 lncRNA upstream 69067 2469154 ~ 2469376 (+) True G274215
TU311111 lncRNA upstream 115249 2412265 ~ 2423194 (+) True G274207
TU311159 lncRNA downstream 5295 2543964 ~ 2544190 (+) True G274253
TU311144 lncRNA downstream 10378 2549047 ~ 2552438 (+) True G274238
TU311143 lncRNA downstream 17030 2555699 ~ 2563126 (+) True G274237
TU311136 lncRNA downstream 43213 2581882 ~ 2583267 (+) True G274231
TU311186 lncRNA downstream 83089 2621758 ~ 2630358 (+) True G274272
CI01000069_02466489_02467309.mRNA mRNA upstream 71046 2465780 ~ 2467397 (+) True CI01000069_02466489_02467309
CI01000069_02454588_02465668.mRNA mRNA upstream 72762 2454588 ~ 2465681 (+) True CI01000069_02454588_02465668
CI01000069_02393010_02396796.mRNA mRNA upstream 140711 2393010 ~ 2397732 (+) True CI01000069_02393010_02396796
CI01000069_02311794_02313206.mRNA mRNA upstream 223433 2311794 ~ 2315010 (+) True CI01000069_02311794_02313206
CI01000069_02256234_02263001.mRNA mRNA upstream 275322 2256169 ~ 2263121 (+) True CI01000069_02256234_02263001
CI01000069_02540591_02547912.mRNA mRNA downstream 1841 2540510 ~ 2548022 (+) True CI01000069_02540591_02547912
CI01000069_02818349_02821933.mRNA mRNA downstream 279571 2818240 ~ 2821937 (+) True CI01000069_02818349_02821933
CI01000069_02857196_02860525.mRNA mRNA downstream 317753 2856422 ~ 2860562 (+) True CI01000069_02857196_02860525
CI01000069_02862381_02864927.mRNA mRNA downstream 322985 2861654 ~ 2864993 (+) True CI01000069_02862381_02864927
CI01000069_02894136_02894807.mRNA mRNA downstream 354749 2893418 ~ 2894947 (+) False CI01000069_02894136_02894807
TU311015 other upstream 366250 2112843 ~ 2172193 (+) True G274124
TU310194 other upstream 2059362 477727 ~ 479081 (+) True G273359
TU311181 other downstream 133955 2672624 ~ 2681158 (+) True G274270
TU311230 other downstream 354177 2892846 ~ 2892971 (+) True G274314
TU311499 other downstream 1074048 3636100 ~ 3638430 (+) True CI01000069_03636156_03639756
TU311564 other downstream 1261354 3800023 ~ 3803501 (+) True G274603
TU311582 other downstream 1590459 4129128 ~ 4133378 (+) True G274619

Expression Profile