RNA id: TU311283


Basic Information

Item Value
RNA id TU311283
length 264
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G274366
representative True

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2741750 ~ 2742013 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTTTTTTCTTGTTCGTAAAGCCGTTTCACTTGGATATACTTTATAAAAGATTATCACAACTTCCGTTTTATTCTGACTTCGCCAAGTAAAGATGCCTTTAAAGTGAAAGGTGACTGCATAAAACAGAATACAAAAAACAGAGAAGTGTTATGAAACAGGGCATGTTTGATGCATAATCACAGGCCTGACCTGATCTGACAATGAGTGAGGGACAGAAAGAGGAGGAACAGCGATATGTAATGGAGAAGATAAACACCAGAGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU311282 lncRNA upstream 1437 2740046 ~ 2740313 (+) True G274365
TU311281 lncRNA upstream 1731 2739806 ~ 2740019 (+) True G274364
TU311280 lncRNA upstream 2088 2739446 ~ 2739662 (+) True G274363
TU311279 lncRNA upstream 2444 2738972 ~ 2739306 (+) True G274362
TU311278 lncRNA upstream 3089 2738433 ~ 2738661 (+) True G274361
TU311284 lncRNA downstream 287 2742300 ~ 2742752 (+) True G274367
TU311285 lncRNA downstream 2953 2744966 ~ 2745257 (+) True G274368
TU311286 lncRNA downstream 3895 2745908 ~ 2746176 (+) True G274369
TU311287 lncRNA downstream 4179 2746192 ~ 2746536 (+) True G274370
TU311288 lncRNA downstream 5052 2747065 ~ 2747497 (+) True G274371
CI01000069_02540591_02547912.mRNA mRNA upstream 193728 2540510 ~ 2548022 (+) True CI01000069_02540591_02547912
CI01000069_02466489_02467309.mRNA mRNA upstream 274353 2465780 ~ 2467397 (+) True CI01000069_02466489_02467309
CI01000069_02454588_02465668.mRNA mRNA upstream 276069 2454588 ~ 2465681 (+) True CI01000069_02454588_02465668
CI01000069_02393010_02396796.mRNA mRNA upstream 344018 2393010 ~ 2397732 (+) True CI01000069_02393010_02396796
CI01000069_02311794_02313206.mRNA mRNA upstream 426740 2311794 ~ 2315010 (+) True CI01000069_02311794_02313206
CI01000069_02818349_02821933.mRNA mRNA downstream 76227 2818240 ~ 2821937 (+) True CI01000069_02818349_02821933
CI01000069_02857196_02860525.mRNA mRNA downstream 114409 2856422 ~ 2860562 (+) True CI01000069_02857196_02860525
CI01000069_02862381_02864927.mRNA mRNA downstream 119641 2861654 ~ 2864993 (+) True CI01000069_02862381_02864927
CI01000069_02894136_02894807.mRNA mRNA downstream 151405 2893418 ~ 2894947 (+) False CI01000069_02894136_02894807
CI01000069_02903983_02905418.mRNA mRNA downstream 161970 2903983 ~ 2905654 (+) True CI01000069_02903983_02905418
TU311181 other upstream 60592 2672624 ~ 2681158 (+) True G274270
TU311015 other upstream 569557 2112843 ~ 2172193 (+) True G274124
TU310194 other upstream 2262669 477727 ~ 479081 (+) True G273359
TU311230 other downstream 150833 2892846 ~ 2892971 (+) True G274314
TU311499 other downstream 870704 3636100 ~ 3638430 (+) True CI01000069_03636156_03639756
TU311564 other downstream 1058010 3800023 ~ 3803501 (+) True G274603
TU311582 other downstream 1387115 4129128 ~ 4133378 (+) True G274619
TU311605 other downstream 1813296 4555309 ~ 4558480 (+) True CI01000069_04556116_04558002

Expression Profile