RNA id: TU312910



Basic Information


Item Value
RNA id TU312910
length 1221
lncRNA type antisense_over
GC content 0.50
exon number 7
gene id G275814
representative True

Chromosome Information


Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3280912 ~ 3284191 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGCCTAGTCAGGAATTTCTTCATCTTGTCTTTGGAAAGGTTTTTGGTGATGCTGCTGGTGTTGTCTACAGACGTAGATGCCAACCAGGCATGAGCCAAGGCATCTTCACATGACATCCTACGCCTGACATCTTTGCTGAGCAGAGAGCTAATGAAATCCTTTGCCTGGTCGGTGATCTCTTCAAAGCTCTCCTCATCAAACTCCCACTTCGCTGCCGTCACGAGAGACAGAGTCTCTGTGTCACTTTCACCCTGGAATGGAGATTCACCGCTCAACAGGATGTAGCAGATGACACCAATGCTCCACATGTCAGTGGCCAGACAGACAGGCTCGAAGCTGATGACCTCTGGAGCAACAAATTCTGGAGTGCCGTGCATCACCTTCAGAGGTGTGTTGGGATCTAACTTGCTAGCGAGTCCAAAGTCAATGATTTTGATCTGAAACCCGGTTCTGTCCACACAGACGATGTTCTCAGGTTTGAGGTCCAGGTGGATGATGTTTTGCTGGTGCATATACTGAATCCCCTCCAGAATTTGACGCACATAGCCCACACTAGATGCTTCTGTGTGCTCATAACTATCATCCACAATACGCTCAAACAGCTCTCCACCAGCAACAAATTCCATCACCATGACCATCTCAGCCTTGTTTTCATATGCAGCAAGGCACTGCACCAGTTTTGGATGGTGTAAGAAGTTCATGAGCTCTATTTCTTTCCTTGCGGCTTCTCTCTCCTTTGCCCGACGGCCTTTGTAGAACTTTCCAGCATATTTACGACCCGTCACCTTATGGGTCATCAGAAACACCTGGCCAAACTTCCCTACTCCTAGTTTATCCAGGACAATATAGTGGTCAGAAACATTATTCTCAGTGTTGATGGTCACATTCACATACTCCACTGGTTTCTCATCACAGGGCTCTCCTGGGTTGTCCATCTTGATTGGTTGGGACTCTTGGCTGGGCTCGCTGATGCCCACAGCGTTACAGGCCCTGACCCGGAAGCAGTATTCTCCCTGAGGCTGGAGTCCTGAGGTCACCCTGAGCGAAGTACTCTTGCACTGGGCTGTGAGCTCTTTCCAGTGGTCAGTCTCACCAGGGCTTTCACAAACCTCCACCACGTATCCCGTCACAGCGCTGCCACCGTCGTAAGATGGCCCAGACCAGGACAAAACCAGAGAGTGAGGGGAAAGAATGCGCACCACGGGGCAGGAGGCAGGAGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU312952 lncRNA downstream 19408 3261296 ~ 3261504 (-) True G275856
TU312939 lncRNA downstream 60871 3219809 ~ 3220041 (-) True G275843
TU312750 lncRNA downstream 385946 2892738 ~ 2894966 (-) True G275658
TU312773 lncRNA downstream 511600 2768956 ~ 2769312 (-) True G275681
TU312764 lncRNA downstream 640378 2640335 ~ 2640534 (-) True G275672
TU312868 lncRNA upstream 22298 3306489 ~ 3312896 (-) True G275772
TU312972 lncRNA upstream 73030 3357221 ~ 3357421 (-) True G275876
TU312974 lncRNA upstream 76297 3360488 ~ 3360701 (-) True G275878
TU312846 lncRNA upstream 311530 3595721 ~ 3627754 (-) True G275750
TU312922 lncRNA upstream 323261 3607452 ~ 3614839 (-) True G275826
CI01000069_03242808_03248880.mRNA mRNA downstream 32032 3241819 ~ 3248880 (-) True CI01000069_03242808_03248880
CI01000069_03032171_03032924.mRNA mRNA downstream 247988 3031990 ~ 3032924 (-) True CI01000069_03032171_03032924
CI01000069_03027056_03028752.mRNA mRNA downstream 252160 3026925 ~ 3028752 (-) True CI01000069_03027056_03028752
CI01000069_03014089_03015762.mRNA mRNA downstream 264406 3012696 ~ 3016506 (-) True CI01000069_03014089_03015762
CI01000069_02997434_03008924.mRNA mRNA downstream 271988 2997275 ~ 3008924 (-) False CI01000069_02997434_03008924
CI01000069_03298533_03302831.mRNA mRNA upstream 14006 3298197 ~ 3302831 (-) True CI01000069_03298533_03302831
CI01000069_03315611_03353645.mRNA mRNA upstream 31321 3315512 ~ 3353733 (-) True CI01000069_03315611_03353645
CI01000069_03365921_03371931.mRNA mRNA upstream 81272 3365463 ~ 3371944 (-) True CI01000069_03365921_03371931
CI01000069_03382399_03395900.mRNA mRNA upstream 97941 3382132 ~ 3395900 (-) True CI01000069_03382399_03395900
CI01000069_03415853_03417644.mRNA mRNA upstream 129934 3414125 ~ 3417644 (-) False CI01000069_03415853_03417644
TU312791 other downstream 202744 2992504 ~ 3078168 (-) True G275699
TU312760 other downstream 280479 2989026 ~ 2991817 (-) True G275668
TU312711 other downstream 650596 2621752 ~ 2630316 (-) True G275624
TU312710 other downstream 650665 2621752 ~ 2630247 (-) False G275624
TU312389 other downstream 1633586 1645768 ~ 1647326 (-) True CI01000069_01645966_01647142
TU312851 other upstream 128782 3426149 ~ 3426374 (-) True G275755
TU312899 other upstream 279102 3563293 ~ 3576335 (-) True CI01000069_03571631_03573352
TU312875 other upstream 481482 3765673 ~ 3769220 (-) True CI01000069_03768812_03787588
TU312842 other upstream 520425 3805663 ~ 3805758 (-) True G275746
TU313201 other upstream 1655330 4942073 ~ 4942199 (-) True G276079

Expression Profile