RNA id: TU311755



Basic Information


Item Value
RNA id TU311755
length 586
lncRNA type read_through
GC content 0.36
exon number 2
gene id G274775
representative True

Chromosome Information


Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4257444 ~ 4306259 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTTCATTTTTGGGTGAACTAACCCTTTAATGCTAGTGATATAATGTTGATTAGTCGTATGTTAAGGACTGCCATGGCATTTGTATTATGGATTAAATCAACATCGGAGACCTGCCTGCCCACTGCCACCACAGCCAGTACTACTGGCCCAGACCAACCACTGGCCTACCATGGTGTCTCAAACAGGCAGGTGCAAGTGGCTGTAAGTGTATTGTTAGGGTGAAGTGCACCAAATGTGAGATGTACCTGTGCCTCACCTCTTTAAAAAAAAATGCTTTTTGAAGTTTCGTACAGAAAAAGGTGAAGTTTCAAGGATTATGGAGGGCTCATGTTCATAACCTTCCTCTCATAAGATTGCGTAATGTTGAATTTTCATGAACTGCAATGTTTTTGGTTTTATGTCAATGTTTTATGATACATGATGAACAGTATTATATTTGTTTTTAACTGTCTAAATTTGCAATTTAAGTAATATTCATGAAAAATGTAATGAAATTCAAAGAATATAAAGCATTTTCCAGCAAAAGAGAATGGAATAAATAAAAGCACACGCTGTTGGAAAATATATGTAAGGTGTTGTTTATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU311632 lncRNA upstream 65380 4184202 ~ 4192064 (+) True G274669
TU311622 lncRNA upstream 116277 4140880 ~ 4141167 (+) True G274659
TU311634 lncRNA upstream 116682 4139130 ~ 4140762 (+) True G274671
TU311738 lncRNA upstream 255221 3998983 ~ 4002223 (+) True G274760
TU311717 lncRNA upstream 325040 3932068 ~ 3932404 (+) True G274748
TU311649 lncRNA downstream 114870 4421129 ~ 4422342 (+) True CI01000069_04412903_04419976
TU311804 lncRNA downstream 121831 4428090 ~ 4428396 (+) True G274823
TU311805 lncRNA downstream 122389 4428648 ~ 4429418 (+) True G274824
TU311806 lncRNA downstream 124755 4431014 ~ 4433247 (+) True G274825
TU311807 lncRNA downstream 127479 4433738 ~ 4433938 (+) True G274826
CI01000069_04230190_04235064.mRNA mRNA upstream 22363 4229369 ~ 4235081 (+) True CI01000069_04230190_04235064
CI01000069_04203202_04214241.mRNA mRNA upstream 43119 4203202 ~ 4214325 (+) True CI01000069_04203202_04214241
CI01000069_04165021_04170544.mRNA mRNA upstream 86889 4164128 ~ 4170555 (+) True CI01000069_04165021_04170544
CI01000069_04151875_04159107.mRNA mRNA upstream 98253 4151875 ~ 4159191 (+) True CI01000069_04151875_04159107
CI01000069_04143761_04147538.mRNA mRNA upstream 109765 4143761 ~ 4147679 (+) True CI01000069_04143761_04147538
CI01000069_04412903_04419976.mRNA mRNA downstream 104976 4411235 ~ 4421188 (+) False CI01000069_04412903_04419976
CI01000069_04425809_04438936.mRNA mRNA downstream 117684 4423943 ~ 4438992 (+) False CI01000069_04425809_04438936
CI01000069_04527086_04527715.mRNA mRNA downstream 220742 4527001 ~ 4527814 (+) True CI01000069_04527086_04527715
CI01000069_04556116_04558002.mRNA mRNA downstream 249010 4555269 ~ 4558357 (+) False CI01000069_04556116_04558002
CI01000069_04562461_04568806.mRNA mRNA downstream 256202 4562461 ~ 4568896 (+) True CI01000069_04562461_04568806
TU311582 other upstream 124066 4129128 ~ 4133378 (+) True G274619
TU311564 other upstream 453943 3800023 ~ 3803501 (+) True G274603
TU311499 other upstream 619014 3636100 ~ 3638430 (+) True CI01000069_03636156_03639756
TU311230 other upstream 1362556 2892846 ~ 2892971 (+) True G274314
TU311181 other upstream 1576286 2672624 ~ 2681158 (+) True G274270
TU311605 other downstream 249050 4555309 ~ 4558480 (+) True CI01000069_04556116_04558002
TU311947 other downstream 618208 4924467 ~ 4926687 (+) True G274953
TU312063 other downstream 739968 5046227 ~ 5048990 (+) True CI01000069_05046565_05048523

Expression Profile