RNA id: TU311922


Basic Information

Item Value
RNA id TU311922
length 219
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G274937
representative True

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4766922 ~ 4767140 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTTTGGTGGGGCTCTGCCCCACCTGCCCTTACAGACGAGCCGTGGCTGGTAAGAACTCTAAACAGCATGAAAGGTTTCCCCAGTAGCAATAAATAAGGGAAAGGCACTTTAGGCTATATTGAAGTTGACGCCATAGGATATCTGAAGCACCTTCAAATGGTGGCTAGAGGTTCTTCAAATAGCTCTGCCTGTGTAGCATCCTGCAGAATTGAAAATTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU311881 lncRNA upstream 70850 4685176 ~ 4696072 (+) True G274897
TU311877 lncRNA upstream 95819 4670589 ~ 4671103 (+) True G274893
TU311612 lncRNA upstream 141830 4590868 ~ 4625092 (+) True G274649
TU311589 lncRNA upstream 164904 4599124 ~ 4602018 (+) True G274626
TU311644 lncRNA upstream 269373 4492640 ~ 4497549 (+) True G274681
TU311923 lncRNA downstream 392 4767532 ~ 4767747 (+) True G274938
TU311934 lncRNA downstream 61608 4828748 ~ 4831017 (+) True G274948
TU311958 lncRNA downstream 68430 4835570 ~ 4839648 (+) True G274964
TU311970 lncRNA downstream 80882 4848022 ~ 4851034 (+) True G274976
TU311971 lncRNA downstream 87193 4854333 ~ 4854569 (+) True G274977
CI01000069_04612170_04623197.mRNA mRNA upstream 143471 4612170 ~ 4623451 (+) True CI01000069_04612170_04623197
CI01000069_04562461_04568806.mRNA mRNA upstream 198026 4562461 ~ 4568896 (+) True CI01000069_04562461_04568806
CI01000069_04556116_04558002.mRNA mRNA upstream 208565 4555269 ~ 4558357 (+) False CI01000069_04556116_04558002
CI01000069_04527086_04527715.mRNA mRNA upstream 239108 4527001 ~ 4527814 (+) True CI01000069_04527086_04527715
CI01000069_04425809_04438936.mRNA mRNA upstream 327930 4423943 ~ 4438992 (+) False CI01000069_04425809_04438936
CI01000069_04773976_04774606.mRNA mRNA downstream 6836 4773976 ~ 4774959 (+) True CI01000069_04773976_04774606
CI01000069_04776672_04785162.mRNA mRNA downstream 8230 4775370 ~ 4785432 (+) True CI01000069_04776672_04785162
CI01000069_04791495_04792375.mRNA mRNA downstream 24211 4791351 ~ 4792680 (+) True CI01000069_04791495_04792375
CI01000069_04917103_04918567.mRNA mRNA downstream 149963 4917103 ~ 4918901 (+) True CI01000069_04917103_04918567
CI01000069_04981836_04982608.mRNA mRNA downstream 213819 4980959 ~ 4983096 (+) True CI01000069_04981836_04982608
TU311605 other upstream 208442 4555309 ~ 4558480 (+) True CI01000069_04556116_04558002
TU311582 other upstream 633544 4129128 ~ 4133378 (+) True G274619
TU311564 other upstream 963421 3800023 ~ 3803501 (+) True G274603
TU311499 other upstream 1128492 3636100 ~ 3638430 (+) True CI01000069_03636156_03639756
TU311230 other upstream 1872034 2892846 ~ 2892971 (+) True G274314
TU311947 other downstream 157327 4924467 ~ 4926687 (+) True G274953
TU312063 other downstream 279087 5046227 ~ 5048990 (+) True CI01000069_05046565_05048523

Expression Profile