RNA id: TU313222


Basic Information

Item Value
RNA id TU313222
length 1230
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G276100
representative True

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 5314674 ~ 5315903 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAAGAAGAACACCGTCATGTTTATAATTGTGATGATGAGGGCTTTCCAGGATTAAGTAAACACTGGATTTTCAAAAGTACGTGATGTTCACGGCTCCACTGTTGCAGTAAACTTGCACAACATTTTTGAATAAATAATTTATTAGATGCACATATTTATTAGACTTTACATTTTTACACCCCTAAACATGACGTGGAACAAAATGAACTGTGATTGGTTGCGTAACATGTCAGTCAAATGTCCTCTTGGGCGGTCCTTGGCCAATGAAAGCTGTGATAGAGTCCAGACCTTCTGCCGTCAGTCTGAAGGTCTGGCTACGCGAGACTATACTATGGTAGTAAAGCAGCGAGTTACGTCGTTGTACGGGAAAAGCACCCCTGGTCAGGATGTTTAAAAACAGAGTGATGTTTTGATAGCATCACAGATTTACAGTTATTTCACTTTTCAGGAGAATCAACCTACAGTTTTTTTTACTTATACAATAGTTGTGGGATAGATAACGTTTTTTAACACACAAAAAAAATATGACACACTTAAAGTCACCATGAAATCAAAATTGACAACTCCTATTTTTATGGAATATTGCTGCAATTATAATAAATGATTTATCCATGTACATATATATATATTTTTTTAAAATTCACGTGCCCTCATGATATTTAAACAAAATAACTTCCCCTCCTTCTTGCAGCAACATCTCTTCTCTTCTCTGATGACATGTTTACTGGCACAAGAGCGGGACAACCTGTCGCTCACATGAGATCGACCAATAGCTAACCACAACTATCCAATGATCCAATCAATTCCCAGTGGACAAAATCAAGTCCCACCCGACATTTTTTTCTTTTTTTACTCAGATATATCACAATAAGGAAGAAAAGACTATCTCAACTTCCGTTTCATCTCGACTTTAAGTGTTTAAGCTCATATTAAACATCTCTGAAGTGTCTCTCTCACTAAGACACTGTATTCAGTAGAAATTTCTTCCTGTTCTTTCTTGAAGTGTCTGGTTTAATGGGTGGGTACTAGTCTATAGAGGAAACAAAAGGCATGGTTTTATTTTAGCTTGTTTTTACACTTGGTACACTCTGTATTTTTTCTTCCATATTCATTATGGTTGTCTAAACGTGCAATGTTTGAAACATGTAATCATAATAATAGTGATTTCAAAATGAATTATTTCCATTTAAATAGGGTTTTTACCAAATTAAAATCAGTTTGAAAGATGGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU313360 lncRNA downstream 119146 5193636 ~ 5195528 (-) False G276224
TU313357 lncRNA downstream 119738 5193636 ~ 5194936 (-) False G276224
TU313358 lncRNA downstream 119738 5194043 ~ 5194936 (-) True G276224
TU313232 lncRNA downstream 123147 5190068 ~ 5191527 (-) True G276110
TU313355 lncRNA downstream 127084 5187373 ~ 5187590 (-) True G276222
CI01000069_05227862_05278522.mRNA mRNA downstream 36152 5227862 ~ 5278522 (-) True CI01000069_05227862_05278522
CI01000069_05100248_05121420.mRNA mRNA downstream 193254 5100067 ~ 5121420 (-) True CI01000069_05100248_05121420
CI01000069_05042346_05044105.mRNA mRNA downstream 269439 5042275 ~ 5045235 (-) True CI01000069_05042346_05044105
CI01000069_05025745_05032197.mRNA mRNA downstream 282477 5025297 ~ 5032197 (-) True CI01000069_05025745_05032197
CI01000069_04996783_05001227.mRNA mRNA downstream 313447 4996340 ~ 5001227 (-) True CI01000069_04996783_05001227
CI01000069_05321785_05324036.mRNA mRNA upstream 5368 5321271 ~ 5324097 (-) True CI01000069_05321785_05324036
TU313215 other downstream 328250 4985966 ~ 4986424 (-) True CI01000069_04985959_04986408
TU313201 other downstream 372475 4942073 ~ 4942199 (-) True G276079
TU312842 other downstream 1507597 3805663 ~ 3805758 (-) True G275746
TU312875 other downstream 1545454 3765673 ~ 3769220 (-) True CI01000069_03768812_03787588
TU312899 other downstream 1738339 3563293 ~ 3576335 (-) True CI01000069_03571631_03573352

Expression Profile