RNA id: TU319678



Basic Information


Item Value
RNA id TU319678
length 240
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G282014
representative True

Chromosome Information


Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 2800542 ~ 2800781 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGGCTCACAGTCTCCACTCTAATTCATCCCAAAGGTGTTCTGTCGGGTTGAGGTCAGGACTCTGTGCAGGCCAGTCAAGTTCCTCCACACCAAACTCGCTCATCCATGTCTTTATGGACCTTGCTTTGTGCACTGGTGCGCAGTCATGTTGGAACAGGAAGGGGCCATCCCAAAACTGTTCCCACAATGTTGGGAGCATGAAATTGTCCAAAATGTCTTGGTATGCTGAAGCACTAAGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU319652 lncRNA upstream 39488 2760821 ~ 2761054 (+) True G281992
TU319649 lncRNA upstream 45065 2755218 ~ 2755477 (+) True G281989
TU319648 lncRNA upstream 51093 2749220 ~ 2749449 (+) True G281988
TU319622 lncRNA upstream 95731 2704591 ~ 2704811 (+) True G281966
TU319618 lncRNA upstream 103949 2696321 ~ 2696593 (+) True G281962
TU319636 lncRNA downstream 33164 2835565 ~ 2837303 (+) True G281976
TU319739 lncRNA downstream 250339 3051120 ~ 3051524 (+) True G282075
TU319740 lncRNA downstream 251000 3051781 ~ 3052472 (+) True G282076
TU319746 lncRNA downstream 257533 3058314 ~ 3058519 (+) True G282082
TU319754 lncRNA downstream 267824 3068605 ~ 3068899 (+) True G282089
CI01000071_02770135_02797577.mRNA mRNA upstream 2769 2769237 ~ 2797773 (+) True CI01000071_02770135_02797577
CI01000071_02656286_02658917.mRNA mRNA upstream 141445 2656286 ~ 2659097 (+) True CI01000071_02656286_02658917
CI01000071_02539510_02615505.mRNA mRNA upstream 184249 2539183 ~ 2616293 (+) True CI01000071_02539510_02615505
CI01000071_02417387_02420895.mRNA mRNA upstream 379245 2416030 ~ 2421297 (+) True CI01000071_02417387_02420895
CI01000071_02329452_02331682.mRNA mRNA upstream 468511 2329232 ~ 2332031 (+) True CI01000071_02329452_02331682
CI01000071_02815324_02834097.mRNA mRNA downstream 14346 2815127 ~ 2834699 (+) False CI01000071_02815324_02834097
CI01000071_02838185_02847470.mRNA mRNA downstream 37367 2838148 ~ 2847611 (+) True CI01000071_02838185_02847470
CI01000071_02927971_02953988.mRNA mRNA downstream 125868 2926649 ~ 2954167 (+) True CI01000071_02927971_02953988
CI01000071_02960341_02966088.mRNA mRNA downstream 159256 2960037 ~ 2966446 (+) True CI01000071_02960341_02966088
CI01000071_03016024_03022596.mRNA mRNA downstream 213889 3014670 ~ 3022994 (+) True CI01000071_03016024_03022596
TU318234 other upstream 1422872 1375724 ~ 1375792 (+) True G280680
TU317961 other upstream 1878446 905217 ~ 922096 (+) True G280443
TU318001 other upstream 1997225 799775 ~ 799876 (+) True G280464
TU319630 other downstream 3863 2804644 ~ 2804806 (+) True G281974
TU319744 other downstream 255303 3056084 ~ 3056531 (+) True G282080

Expression Profile