RNA id: TU319744



Basic Information


Item Value
RNA id TU319744
length 448
RNA type TUCP
GC content 0.37
exon number 1
gene id G282080
representative True

Chromosome Information


Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 3056084 ~ 3056531 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGCATAGTGTGGAAAGAAATAATGGACAAATGGCAGCAGCAGTGGCAGAATGAAACAAAAGGGAGACATTTATATTCAATACAAAGCAGAGTGGGTGTGTCAAGAGATAATGGTACAAGTAGGAGAGAAGTCATTTTAAGCAGAATAAGAATGGGGCATAACAATCTTAATGGCACTTTACATATTATGGGGAAACACCCAACAGGAATGTGCACACAATGTCAGGAGTACGAAACGGTTGAGCATGTTTTAATATCTTGTGGGAGGTTTATTCAAGAAAGACAAGAAATGATGACCCAGTTACAGAGTTTAGGACGGGTAGAGGGAAGTGTTAAAAGTATTTTAGAGTGTGCAGAGAAACAAAAAGGCAGGAAATATTTATTAGGTTTTTTAAAAGAAACTGGATTGGAGAAGAGAATATAGTGTAAAGGGAATTTAATACAGTAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU319740 lncRNA upstream 3612 3051781 ~ 3052472 (+) True G282076
TU319739 lncRNA upstream 4560 3051120 ~ 3051524 (+) True G282075
TU319636 lncRNA upstream 218781 2835565 ~ 2837303 (+) True G281976
TU319678 lncRNA upstream 255303 2800542 ~ 2800781 (+) True G282014
TU319652 lncRNA upstream 295030 2760821 ~ 2761054 (+) True G281992
TU319746 lncRNA downstream 1783 3058314 ~ 3058519 (+) True G282082
TU319754 lncRNA downstream 12074 3068605 ~ 3068899 (+) True G282089
TU319758 lncRNA downstream 15489 3072020 ~ 3072255 (+) True G282093
TU319776 lncRNA downstream 60979 3117510 ~ 3117800 (+) True G282108
TU319795 lncRNA downstream 100311 3156842 ~ 3172793 (+) True G282127
CI01000071_03016024_03022596.mRNA mRNA upstream 33090 3014670 ~ 3022994 (+) True CI01000071_03016024_03022596
CI01000071_02960341_02966088.mRNA mRNA upstream 89638 2960037 ~ 2966446 (+) True CI01000071_02960341_02966088
CI01000071_02927971_02953988.mRNA mRNA upstream 101917 2926649 ~ 2954167 (+) True CI01000071_02927971_02953988
CI01000071_02838185_02847470.mRNA mRNA upstream 208473 2838148 ~ 2847611 (+) True CI01000071_02838185_02847470
CI01000071_02815324_02834097.mRNA mRNA upstream 221385 2815127 ~ 2834699 (+) False CI01000071_02815324_02834097
CI01000071_03062277_03064334.mRNA mRNA downstream 5307 3061838 ~ 3064706 (+) True CI01000071_03062277_03064334
CI01000071_03108610_03108994.mRNA mRNA downstream 51913 3108444 ~ 3108994 (+) True CI01000071_03108610_03108994
CI01000071_03329447_03356262.mRNA mRNA downstream 272916 3329447 ~ 3357152 (+) True CI01000071_03329447_03356262
CI01000071_03361493_03387786.mRNA mRNA downstream 304962 3361493 ~ 3387878 (+) False CI01000071_03361493_03387786
CI01000071_03414821_03439810.mRNA mRNA downstream 358290 3414821 ~ 3439810 (+) True CI01000071_03414821_03439810
TU319630 other upstream 227480 2804644 ~ 2804806 (+) True G281974
TU318234 other upstream 1678414 1375724 ~ 1375792 (+) True G280680
TU317961 other upstream 2133988 905217 ~ 922096 (+) True G280443
TU318001 other upstream 2252767 799775 ~ 799876 (+) True G280464

Expression Profile