RNA id: TU327317



Basic Information


Item Value
RNA id TU327317
length 241
lncRNA type antisense_over
GC content 0.61
exon number 1
gene id G288649
representative True

Chromosome Information


Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 62859 ~ 63099 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACTGGTGTTAAAGTGTGTGTACCTGTGAGAGCTCAGGCTGGGACAGTCCGGGCTGGCTCATCTGTGAAGGCTGGCTCATGGTGATGTAGCCCTGGGTCAGAGGACCCTGAGAGAAGGGCTGGGACACCAGATCCTGACTGGCCTGGCTGCTCGGCATGTTGGCCTGCCCGCTGCCGTGGTTACCCGTGCCACGGTTCCTCTGACGACCTCCACGACCCCCGGTCTTACCTTTAGGAGCACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU327315 lncRNA upstream 2070 58382 ~ 60789 (+) True G288647
TU327366 lncRNA upstream 4619 57929 ~ 58240 (+) True G288686
TU327365 lncRNA upstream 4970 57467 ~ 57889 (+) True G288685
TU327350 lncRNA upstream 35064 25966 ~ 27795 (+) True G288670
TU327349 lncRNA upstream 37174 24342 ~ 25685 (+) True G288669
TU327320 lncRNA downstream 626 63725 ~ 64024 (+) True G288652
TU327323 lncRNA downstream 1265 64364 ~ 64947 (+) True G288655
TU327325 lncRNA downstream 5296 68395 ~ 69408 (+) True G288657
TU327330 lncRNA downstream 21788 84887 ~ 86414 (+) True G288662
TU327382 lncRNA downstream 44327 107426 ~ 107718 (+) False G288699
CI01000075_00015676_00016381.mRNA mRNA upstream 46430 15676 ~ 16429 (+) True CI01000075_00015676_00016381
CI01000075_00001171_00013300.mRNA mRNA upstream 49498 1171 ~ 13361 (+) True CI01000075_00001171_00013300
CI01000075_00093704_00094561.mRNA mRNA downstream 30112 93211 ~ 94652 (+) True CI01000075_00093704_00094561
CI01000075_00110314_00117133.mRNA mRNA downstream 46929 110028 ~ 117267 (+) True CI01000075_00110314_00117133
CI01000075_00190821_00197570.mRNA mRNA downstream 127467 190566 ~ 197909 (+) True CI01000075_00190821_00197570
CI01000075_00216589_00224690.mRNA mRNA downstream 153030 216129 ~ 224858 (+) True CI01000075_00216589_00224690
CI01000075_00252158_00255198.mRNA mRNA downstream 189059 252158 ~ 255206 (+) True CI01000075_00252158_00255198
TU327394 other downstream 172299 235398 ~ 237271 (+) True G288708
TU327465 other downstream 242009 305108 ~ 307921 (+) False G288755
TU327648 other downstream 854402 917501 ~ 922416 (+) False CI01000075_00917306_00921588
TU327647 other downstream 854815 917914 ~ 922416 (+) True CI01000075_00917306_00921588
TU328138 other downstream 1265687 1328786 ~ 1363443 (+) True G289317

Expression Profile