RNA id: CI01000080_03823638_03839211.mRNA



Basic Information


Item Value
RNA id CI01000080_03823638_03839211.mRNA
length 1506
RNA type mRNA
GC content 0.49
exon number 7
gene id CI01000080_03823638_03839211
representative False

Chromosome Information


Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 3823433 ~ 3839456 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACCTTTTACTGCCCAGTTCCGCTTTACAAACTCTTCCACCCTCACTGCTCTGGACGGTGCAGCAGCCAAGGAATACACAGAGGTTCCACAGGTGAAGCATGTAATTGTGGTGCATTTATGCCCACAAGACACCGCCCCCTGACAGAATCGTCTCAGACTCCCATCCAGGGCATGTCAATTTTACTTCTTCTCTAGCTGCGAAGGCTTACAGTGCTGCTGGGCAGGCTGCCTCTGTCCTGCATGCCATGGCCAGCCTGCCGGCCATTAAAAGATCTGCCCGAGGCTGTCACACACAAAGCCGGGTCCAGTCGGGGTACAAGGAGCAAGGTAGCTGTTTCAGCGCACCCTCAAGTATGACCACAGGGTCGGGATGTGATACTTCCCATGCTCTGCCACCAGTCACTGTGTTTGTAGAAGCTCCTCCTTCTTCAGATGAGACATACACTGTAGATGAGACAGAATGCATCAAAGTTCCCGGAGTAAAGAAAAAACATGTTATTTTTGTGCTACTGGCAGATCCAAAAGGGATTACAAAAACGATCATGAACACATTTCAAACACTCCCCTTTAAAAAGGGAAAACAGATGGAAAAAACTTCTAGATATATACCCTTCACATCGTTTTATAGCGAAAGAAAACATGTCTTAAAAACATGTTCAAGTTGCCGCAGAACAGCGTGTTGGTGGTTTTCAGCATGGGGTGCTTCTCCATGGGTGGGAGGAGTGAATGTCGCCTCAAATCTACTGGCAGAGGAGTGCCAGACCAGAGAAAGCAAATATTTTGCTAGTCTTGCAGCTGTGCAGGTTCCATGTAGAGTGACTTCAGTTTGGAAAAGGGCCAAGCCTCAGCGGGGAAACGGTCAAGATAAAAAACGCTCCAGCAAAACAATATTGGCCATAATTAGAGTGTTAAATCACATGGGCTGTGAGGACTATGAATGGCGTCAGCGCCCTGAGCCCACCGCAGACCCAGCAGCCAGGAGATCCAAGTCTGAACAGGTGCATGAGTCAACCCCCATTTCCTTCACGGAGCTAACCCATGAGGCCACAGTTGTCCCGGAGCCCAAGCCTGTTAATAAGTCTGACCAGCGAGTGAGGATTGTCGGCGCTGTCAGCCAGCAGCCAAGGCGTGCCTCAATAGCCTGTCTCGTGGAGCCCATTTTCCCCAGGAAGCACTGTGACTCAGTTGTGGTTGACTGTGGAGATCTCTACATGTTACAGCCCTGCGAGTGGCATGTTTTCCTAGTTCACTTTGAGGTCCTCTTCTGTCCCAAAGTATCCTCTTCCCCTTCTAACAGATGAGATGGCTAATATTTCAGTCAGCACACAAGCAAATGTTTCACACTGTATGTACAGTCTTTGTGGAAAACTGACGTGGTCCCTAGCGATAAAATCTTTTGCAGGCGCAATCGCTTCAGGCCTGTGCAATCTCGCCTGTTTTATTTTTCTATACAGCTAGGCTGCATTTCATGACTCATTCTCTCAGACAAGACCTTGGAATAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU332220 lncRNA downstream 60316 3762147 ~ 3763117 (-) True G292726
TU332231 lncRNA downstream 61542 3761519 ~ 3761891 (-) True G292737
TU332210 lncRNA downstream 62230 3756074 ~ 3761203 (-) True G292716
TU332289 lncRNA downstream 139253 3683504 ~ 3684180 (-) True G292794
TU332152 lncRNA downstream 211502 3611679 ~ 3611931 (-) True G292700
TU332344 lncRNA upstream 29851 3869307 ~ 3869513 (-) True G292843
TU332364 lncRNA upstream 182439 4021895 ~ 4022370 (-) True G292863
TU332374 lncRNA upstream 186904 4026360 ~ 4028482 (-) True G292868
TU332414 lncRNA upstream 298174 4137630 ~ 4140895 (-) True G292905
TU332416 lncRNA upstream 301617 4141073 ~ 4141365 (-) True G292907
CI01000080_03768413_03792359.mRNA mRNA downstream 31021 3768183 ~ 3792412 (-) True CI01000080_03768413_03792359
CI01000080_03599356_03610857.mRNA mRNA downstream 212491 3599123 ~ 3610942 (-) True CI01000080_03599356_03610857
CI01000080_03546606_03550758.mRNA mRNA downstream 272467 3546291 ~ 3550966 (-) False CI01000080_03546606_03550758
CI01000080_03460127_03482686.mRNA mRNA downstream 340747 3460127 ~ 3482686 (-) True CI01000080_03460127_03482686
CI01000080_03421006_03421194.mRNA mRNA downstream 402239 3420775 ~ 3421194 (-) True CI01000080_03421006_03421194
CI01000080_03858298_03868014.mRNA mRNA upstream 18347 3857803 ~ 3868279 (-) True CI01000080_03858298_03868014
CI01000080_03871122_03871424.mRNA mRNA upstream 31361 3870817 ~ 3871885 (-) True CI01000080_03871122_03871424
CI01000080_03882251_03905283.mRNA mRNA upstream 42759 3882215 ~ 3905283 (-) True CI01000080_03882251_03905283
CI01000080_03925953_03961599.mRNA mRNA upstream 86074 3925530 ~ 3961817 (-) True CI01000080_03925953_03961599
CI01000080_03972165_03981008.mRNA mRNA upstream 132675 3972131 ~ 3982765 (-) True CI01000080_03972165_03981008
TU332208 other downstream 95423 3715481 ~ 3728010 (-) True G292714
TU331947 other downstream 605030 3209234 ~ 3218403 (-) False G292516
TU331945 other downstream 605275 3208985 ~ 3218158 (-) False G292516
TU331946 other downstream 605275 3209234 ~ 3218158 (-) False G292516
TU331774 other downstream 1080187 2733587 ~ 2743246 (-) True G292387

Expression Profile