RNA id: TU332344



Basic Information


Item Value
RNA id TU332344
length 207
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G292843
representative True

Chromosome Information


Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 3869307 ~ 3869513 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTCATTTTTGGGTGAACTAACCTTTAAGACTGGAGTACACTACACAACCTTTAAAATCTGAACAGATTTTAAAACACTAGGCATCATATACTAAACGACGGAGGATTACACACAACAAACTCACACAGAAACACGCACCTTGTTGCTAGGAGATGCATAACAGATACGCAGGAGATGACCGTAGTATCTGAAAAAAACGAGCCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU332334 lncRNA downstream 31129 3837979 ~ 3838178 (-) True G292833
TU332326 lncRNA downstream 42137 3826939 ~ 3827170 (-) True CI01000080_03823638_03839211
TU332321 lncRNA downstream 45394 3823678 ~ 3823913 (-) False CI01000080_03823638_03839211
TU332220 lncRNA downstream 106190 3762147 ~ 3763117 (-) True G292726
TU332231 lncRNA downstream 107416 3761519 ~ 3761891 (-) True G292737
TU332364 lncRNA upstream 152382 4021895 ~ 4022370 (-) True G292863
TU332374 lncRNA upstream 156847 4026360 ~ 4028482 (-) True G292868
TU332414 lncRNA upstream 268117 4137630 ~ 4140895 (-) True G292905
TU332416 lncRNA upstream 271560 4141073 ~ 4141365 (-) True G292907
TU332415 lncRNA upstream 272101 4141614 ~ 4142126 (-) True G292906
CI01000080_03858298_03868014.mRNA mRNA downstream 1028 3857803 ~ 3868279 (-) True CI01000080_03858298_03868014
CI01000080_03823638_03839211.mRNA mRNA downstream 29851 3823433 ~ 3839456 (-) False CI01000080_03823638_03839211
CI01000080_03768413_03792359.mRNA mRNA downstream 76895 3768183 ~ 3792412 (-) True CI01000080_03768413_03792359
CI01000080_03599356_03610857.mRNA mRNA downstream 258365 3599123 ~ 3610942 (-) True CI01000080_03599356_03610857
CI01000080_03546606_03550758.mRNA mRNA downstream 318341 3546291 ~ 3550966 (-) False CI01000080_03546606_03550758
CI01000080_03871122_03871424.mRNA mRNA upstream 1304 3870817 ~ 3871885 (-) True CI01000080_03871122_03871424
CI01000080_03882251_03905283.mRNA mRNA upstream 12702 3882215 ~ 3905283 (-) True CI01000080_03882251_03905283
CI01000080_03925953_03961599.mRNA mRNA upstream 56017 3925530 ~ 3961817 (-) True CI01000080_03925953_03961599
CI01000080_03972165_03981008.mRNA mRNA upstream 102618 3972131 ~ 3982765 (-) True CI01000080_03972165_03981008
CI01000080_04006295_04009794.mRNA mRNA upstream 136668 4006181 ~ 4009794 (-) True CI01000080_04006295_04009794
TU332208 other downstream 141297 3715481 ~ 3728010 (-) True G292714
TU331947 other downstream 650904 3209234 ~ 3218403 (-) False G292516
TU331945 other downstream 651149 3208985 ~ 3218158 (-) False G292516
TU331946 other downstream 651149 3209234 ~ 3218158 (-) False G292516
TU331774 other downstream 1126061 2733587 ~ 2743246 (-) True G292387

Expression Profile