RNA id: CI01000082_00691711_00692356.mRNA


Basic Information

Item Value
RNA id CI01000082_00691711_00692356.mRNA
length 224
RNA type mRNA
GC content 0.44
exon number 3
gene id CI01000082_00691711_00692356
representative True

Chromosome Information

Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 691643 ~ 692356 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGGAGACACAAAGGATCTTCATGAGGAGTTTGGCTTTTGTGTTCATTGCATCTGTGATCTGGACTATAACAGTCTCAGCACAGGCTGATCAGAAGCAGAGCTCAAAGAAACAAACGCCAGACTTCCACACCATAACCAGCATCATCTATCAGTGAGCACACTCGTGTGGGAGGATCTACCTAATCAACTGAGGACTCGTGAATCATGAACATCTGAAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU334763 lncRNA downstream 8595 682455 ~ 683048 (-) True G294838
TU334718 lncRNA downstream 112556 577785 ~ 579087 (-) True G294804
TU334717 lncRNA downstream 114712 575216 ~ 576931 (-) True G294803
TU334703 lncRNA downstream 123325 553559 ~ 568318 (-) False G294792
TU334745 lncRNA upstream 1699 694055 ~ 694614 (-) True G294826
TU334766 lncRNA upstream 4902 697258 ~ 697524 (-) True G294841
TU334767 lncRNA upstream 5392 697748 ~ 697958 (-) True G294842
TU334769 lncRNA upstream 7286 699642 ~ 699866 (-) True G294844
TU334772 lncRNA upstream 13050 705406 ~ 705745 (-) True G294847
CI01000082_00689066_00690051.mRNA mRNA downstream 1536 688512 ~ 690107 (-) False CI01000082_00689066_00690051
CI01000082_00678125_00678798.mRNA mRNA downstream 12804 678110 ~ 678839 (-) False CI01000082_00678125_00678798
CI01000082_00666387_00667509.mRNA mRNA downstream 23805 665937 ~ 667838 (-) False CI01000082_00666387_00667509
CI01000082_00597462_00611609.mRNA mRNA downstream 80034 596319 ~ 611609 (-) False CI01000082_00597462_00611609
CI01000082_00445788_00458726.mRNA mRNA downstream 232917 444474 ~ 458726 (-) False CI01000082_00445788_00458726
CI01000082_00692849_00695595.mRNA mRNA upstream 415 692771 ~ 695635 (-) False CI01000082_00692849_00695595
CI01000082_00847325_00903986.mRNA mRNA upstream 154969 847325 ~ 903986 (-) True CI01000082_00847325_00903986
CI01000082_01040425_01063941.mRNA mRNA upstream 347884 1040240 ~ 1064660 (-) True CI01000082_01040425_01063941
CI01000082_01094334_01094888.mRNA mRNA upstream 401978 1094334 ~ 1095207 (-) True CI01000082_01094334_01094888
CI01000082_01097596_01106806.mRNA mRNA upstream 405115 1097471 ~ 1106806 (-) True CI01000082_01097596_01106806
TU334747 other downstream 1209 690328 ~ 690434 (-) True G294827
TU334746 other downstream 1522 688860 ~ 690121 (-) False CI01000082_00689066_00690051
TU334750 other downstream 9337 640013 ~ 682306 (-) True G294828
TU334737 other downstream 20181 670484 ~ 671462 (-) True G294821
TU334751 other downstream 23803 666116 ~ 667840 (-) True CI01000082_00666387_00667509
TU337069 other upstream 1710463 2402819 ~ 2433912 (-) True G296906
TU337114 other upstream 1945915 2638271 ~ 2641782 (-) False CI01000082_02639529_02641582
TU337115 other upstream 1946443 2638799 ~ 2641851 (-) True CI01000082_02639529_02641582
TU337243 other upstream 2144846 2837715 ~ 2838967 (-) True G297060
TU337365 other upstream 2636778 3329728 ~ 3330751 (-) True G297175

Expression Profile