RNA id: TU334769



Basic Information


Item Value
RNA id TU334769
length 225
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G294844
representative True

Chromosome Information


Item Value
chromosome id CI01000082
NCBI id null
chromosome length 5120761
location 699642 ~ 699866 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGTAAAGTTTGTGTACTGATATACGTGTCTTTAGTTGATATGGCATGTTTACTGTGTCCTTTGGCACAACCCAGCAAATTCTTTGTAAGTACAACTTTATAAAAATAACTCATTTGGTTTTTGTGTTTTTCAGTGGTTTGTTTGAGAATGGAGTCTTCTGACTGAGCAAAAATTACATTCCATGACCATTAATCAAGTTCCCCAATCTACTCTGTGTTGGTAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU334767 lncRNA downstream 1684 697748 ~ 697958 (-) True G294842
TU334766 lncRNA downstream 2118 697258 ~ 697524 (-) True G294841
TU334745 lncRNA downstream 3876 694055 ~ 694614 (-) True G294826
TU334763 lncRNA downstream 16594 682455 ~ 683048 (-) True G294838
TU334718 lncRNA downstream 120555 577785 ~ 579087 (-) True G294804
TU334772 lncRNA upstream 5540 705406 ~ 705745 (-) True G294847
TU334778 lncRNA upstream 11925 711791 ~ 713072 (-) True G294853
TU334789 lncRNA upstream 22133 721999 ~ 722221 (-) True G294858
TU335077 lncRNA upstream 211207 911073 ~ 911284 (-) True G295116
TU335104 lncRNA upstream 265672 965538 ~ 965746 (-) True G295143
CI01000082_00692849_00695595.mRNA mRNA downstream 4007 692771 ~ 695635 (-) False CI01000082_00692849_00695595
CI01000082_00691711_00692356.mRNA mRNA downstream 7286 691643 ~ 692356 (-) True CI01000082_00691711_00692356
CI01000082_00689066_00690051.mRNA mRNA downstream 9535 688512 ~ 690107 (-) False CI01000082_00689066_00690051
CI01000082_00678125_00678798.mRNA mRNA downstream 20803 678110 ~ 678839 (-) False CI01000082_00678125_00678798
CI01000082_00666387_00667509.mRNA mRNA downstream 31804 665937 ~ 667838 (-) False CI01000082_00666387_00667509
CI01000082_00847325_00903986.mRNA mRNA upstream 147459 847325 ~ 903986 (-) True CI01000082_00847325_00903986
CI01000082_01040425_01063941.mRNA mRNA upstream 340374 1040240 ~ 1064660 (-) True CI01000082_01040425_01063941
CI01000082_01094334_01094888.mRNA mRNA upstream 394468 1094334 ~ 1095207 (-) True CI01000082_01094334_01094888
CI01000082_01097596_01106806.mRNA mRNA upstream 397605 1097471 ~ 1106806 (-) True CI01000082_01097596_01106806
CI01000082_01113178_01153900.mRNA mRNA upstream 413312 1113178 ~ 1153900 (-) True CI01000082_01113178_01153900
TU334747 other downstream 9208 690328 ~ 690434 (-) True G294827
TU334746 other downstream 9521 688860 ~ 690121 (-) False CI01000082_00689066_00690051
TU334750 other downstream 17336 640013 ~ 682306 (-) True G294828
TU337069 other upstream 1702953 2402819 ~ 2433912 (-) True G296906
TU337114 other upstream 1938405 2638271 ~ 2641782 (-) False CI01000082_02639529_02641582
TU337115 other upstream 1938933 2638799 ~ 2641851 (-) True CI01000082_02639529_02641582
TU337243 other upstream 2137336 2837715 ~ 2838967 (-) True G297060
TU337365 other upstream 2629268 3329728 ~ 3330751 (-) True G297175

Expression Profile